*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Barley-Barley, AxHs/QTL
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Hordeum-Pillen-2H
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
locus
qtl
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Barley - Barley, AxHs/QTL [ View Map Set Info ]
Map Name: Hordeum-Pillen-2H
Map Start: 5
Map Stop: 106
Features by Type:
8 locus
9 qtl
17 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 17 of 17.
Barley - Barley, AxHs/QTL - Hordeum-Pillen-2H
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
HVBKASI locus 50 Barley - Barley, LxHs - Hordeum-LxHs-2H HVBKASI locus 50 () Automated name-based View Maps
Barley - Barley, Lx41 - Hordeum-Lx41-2H HVBKASI locus 81.9 () Automated name-based View Maps
Barley - Barley, B73xCPI - Barley, B73xCPI-2H HVBKASI locus 71.7 () Automated name-based View Maps
Barley - Barley, FxS, FHB QTL - Hordeum-FxS-FHB-QTL-2H HVBKASI locus 91.1 () Automated name-based View Maps
Barley - Barley, HxM/QTL - Hordeum-HxM-base-2H HVBKASI locus 72.7 () Automated name-based View Maps
Barley - Barley, Cali-sib x BowmanBC, QTL - Hordeum-CxB-2H HVBKASI locus 37.3 () Automated name-based View Maps
Barley - Barley, Consensus 2005, SNP - Hordeum-Consensus2005-SNP-2H HVBKASI locus 67.22 () Automated name-based View Maps
Barley - Barley, Abiotic QTL Consensus - Hordeum-QTLConsensus-Abiotic-2H HVBKASI locus 67.22 () Automated name-based View Maps
Barley - Barley, BinMap 2005 - Hordeum-Bins-2H HVBKASI locus 71.5 () Automated name-based View Maps
Barley - Barley, Lina x H.spont, SNP - Hordeum-LiHs-SNP-2H HVBKASI locus 63.14 () Automated name-based View Maps
Barley - Barley, Steptoe x Morex, SNP - Hordeum-StMo-SNP-2H HVBKASI locus 67.71 () Automated name-based View Maps
Barley - Barley, Agronomic QTL Consensus - Hordeum-QTLConsensus-Agronomic-2 HVBKASI locus 67.22 () Automated name-based View Maps
EBmac0415 locus 105 Barley - Barley, Consensus 2005, SNP - Hordeum-Consensus2005-SNP-2H EBmac0415 locus 130.47 () Automated name-based View Maps
Barley - Barley, Lx41 - Hordeum-Lx41-2H EBmac0415 locus 222.8 () Automated name-based View Maps
Barley - Barley, FxS, FHB QTL - Hordeum-FxS-FHB-QTL-2H EBmac0415 locus 175.1 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-2H EBmac0415 locus 114.9 () Automated name-based View Maps
Barley - Barley, Vada x SusPtrit - Hv-Vada/SusPtrit-2H EBmac0415 locus 96.45 () Automated name-based View Maps
Barley - Barley, Abiotic QTL Consensus - Hordeum-QTLConsensus-Abiotic-2H EBmac0415 locus 130.47 () Automated name-based View Maps
Barley - Barley, OWB, SNP - Hordeum-OWB-SNP-2H EBmac0415 locus 146.26 () Automated name-based View Maps
Barley - Barley, Agronomic QTL Consensus - Hordeum-QTLConsensus-Agronomic-2 EBmac0415 locus 130.47 () Automated name-based View Maps
Barley - Barley, LxHs - Hordeum-LxHs-2H EBmac0415 locus 105 () Automated name-based View Maps
Barley - Barley, Nure x Tremois - Hv-Nure/Tremois-2H EBmac0415 locus 134.7 () Automated name-based View Maps
Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-2H EBmac0415 locus 117.86 () Automated name-based View Maps
Barley - Barley, OWB, 2005 - Hordeum-OWB-2005-2H EBmac0415 locus 137.4 () Automated name-based View Maps
Barley - Barley, OWB - Hordeum-OWB-2H EBmac0415 locus 137.8 () Automated name-based View Maps
Barley - Barley, B73xCPI - Barley, B73xCPI-2H EBmac0415 locus 132.3 () Automated name-based View Maps
Barley - Barley, OWB, 2004 - Hordeum-OWB-2004-2H EBmac0415 locus 139.3 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-2H EBmac0415 locus 117.86 () Automated name-based View Maps
Barley - Barley, Lina x H.spont, SNP - Hordeum-LiHs-SNP-2H EBmac0415 locus 67.27 () Automated name-based View Maps
HVCSG locus 106 Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-2H HVCSG locus 132.7 () Automated name-based View Maps
Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-2H HVCSG locus 146 () Automated name-based View Maps
Barley - Barley, BinMap 2005 - Hordeum-Bins-2H HVCSG locus 146 () Automated name-based View Maps
Barley - Barley consensus 2003 - Barley-consensus-2003-2H HVCSG locus 136.6 () Automated name-based View Maps
Barley - Barley, Nure x Tremois - Hv-Nure/Tremois-2H HvCSG locus 152.3 () Automated name-based View Maps
Barley - Barley, B73xCPI - Barley, B73xCPI-2H HVCSG locus 157.3 () Automated name-based View Maps
Bmac0134 locus 5 Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-2H Bmac0134 locus 10.87 () Automated name-based View Maps
Barley - Barley, Nure x Tremois - Hv-Nure/Tremois-2H Bmac0134 locus 3.1 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-2H Bmac0134 locus 10.87 () Automated name-based View Maps
Barley - Barley, Agronomic QTL Consensus - Hordeum-QTLConsensus-Agronomic-2 Bmac0134 locus 11.66 () Automated name-based View Maps
Barley - Barley, LxHs - Hordeum-LxHs-2H Bmac0134 locus 5 () Automated name-based View Maps
Barley - Barley, Abiotic QTL Consensus - Hordeum-QTLConsensus-Abiotic-2H Bmac0134 locus 11.66 () Automated name-based View Maps
Barley - Barley, B73xCPI - Barley, B73xCPI-4H Bmac0134 locus 101 () Automated name-based View Maps
Barley - Barley, Lina x H.spont, SNP - Hordeum-LiHs-SNP-2H Bmac0134 locus 2.35 () Automated name-based View Maps
Barley - Barley, Consensus 2005, SNP - Hordeum-Consensus2005-SNP-2H Bmac0134 locus 11.66 () Automated name-based View Maps
Barley - Barley, Lx41 - Hordeum-Lx41-2H Bmac0134 locus 0 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-2H Bmac0134 locus 7.9 () Automated name-based View Maps
Barley - Barley, L94 x Vada, 2006 - Hv-L94/Vada-2006-2H Bmac0134 locus 1.44 () Automated name-based View Maps
Centromere-2H locus 49 Barley - Barley, KxM - Hordeum-KxM-2H Centromere-2H locus 110.4 - 112.6 () Automated name-based View Maps
Barley - Barley, Steptoe x Morex, SSAP - Hordeum-SxM-SSAP-2H Centromere-2H locus 70.3 - 74.8 () Automated name-based View Maps
Barley - Barley, HxM/QTL - Hordeum-HxM-base-2H Centromere-2H locus 68 () Automated name-based View Maps
Barley - H. bulbosum, PB1 x PB11 - Hbulbosum-PB1xPB11-2 Centromere-2H locus 59 () Automated name-based View Maps
Barley - Barley, OWB - Hordeum-OWB-2H Centromere-2H locus 66.3 () Automated name-based View Maps
Bmag0378 locus 45 Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-2H Bmag378 locus 76.11 () Automated name-based View Maps
Barley - Barley, B73xCPI - Barley, B73xCPI-2H Bmag0378.2H locus 74.4 () Automated name-based View Maps
Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-2H Bmag0378 locus 76.11 () Automated name-based View Maps
Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-2H Bmag378 locus 84 () Automated name-based View Maps
Barley - Barley, Zhedar2, FHB QTL - Hordeum-Zhedar2-FHB-QTL-2H Bmag378 locus 104.1 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-2H Bmag0378 locus 70.9 () Automated name-based View Maps
Barley - Barley, LxHs - Hordeum-LxHs-2H Bmag0378 locus 44 () Automated name-based View Maps
Barley - Barley consensus 2003 - Barley-consensus-2003-2H Bmag378 locus 72.8 () Automated name-based View Maps
Barley - Barley, Lina x H.spont, SNP - Hordeum-LiHs-SNP-2H Bmag0378 locus 68.79 () Automated name-based View Maps
HVM54 locus 103 Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-2H HVM54 locus 122.41 () Automated name-based View Maps
Barley - Barley, B73xCPI - Barley, B73xCPI-2H HVM0054 locus 135 () Automated name-based View Maps
Barley - Barley consensus 2003 - Barley-consensus-2003-2H HVM54 locus 129.2 () Automated name-based View Maps
Barley - Barley, Lina x H.spont, SNP - Hordeum-LiHs-SNP-2H HVM54 locus 69.23 () Automated name-based View Maps
Barley - Barley, Lx41 - Hordeum-Lx41-2H HVM54 locus 267.4 () Automated name-based View Maps
Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-2H HVM54 locus 129.2 () Automated name-based View Maps
Barley - Barley, LxHs - Hordeum-LxHs-2H HVM54 locus 103 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-2H HVM54 locus 122.41 () Automated name-based View Maps
Barley - Barley, Agronomic QTL Consensus - Hordeum-QTLConsensus-Agronomic-2 HVM54 locus 128.03 () Automated name-based View Maps
Barley - Barley, Abiotic QTL Consensus - Hordeum-QTLConsensus-Abiotic-2H HVM54 locus 128.03 () Automated name-based View Maps
Barley - Barley, FxS, FHB QTL - Hordeum-FxS-FHB-QTL-2H HVM54 locus 172.6 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-2H HVM54 locus 118.6 () Automated name-based View Maps
Barley - Barley, L94 x Vada, 2006 - Hv-L94/Vada-2006-2H HVM54 locus 148.62 () Automated name-based View Maps
Barley - Barley, Consensus 2005, SNP - Hordeum-Consensus2005-SNP-2H HVM54 locus 128.03 () Automated name-based View Maps
Barley - Barley, Nure x Tremois - Hv-Nure/Tremois-2H HVM54 locus 136.7 () Automated name-based View Maps
GMS3 locus 48 Barley - Barley, Abiotic QTL Consensus - Hordeum-QTLConsensus-Abiotic-2H GMS003 locus 69.01 () Automated name-based View Maps
Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-2H GMS3 locus 79.6 () Automated name-based View Maps
Barley - Barley consensus 2003 - Barley-consensus-2003-2H GMS3 locus 69.9 () Automated name-based View Maps
QHea.pil-2H.1 qtl 5 No other positions
QHea.pil-2H.2 qtl 48 No other positions
QHea.pil-2H.3 qtl 50 No other positions
QHea.pil-2H.4 qtl 103 No other positions
QTgw.pil-2H.1 qtl 5 No other positions
QTgw.pil-2H.2 qtl 48 No other positions
QTgw.pil-2H.3 qtl 50 No other positions
QYld.pil-2H.1 qtl 103 No other positions
QYld.pil-2H.2 qtl 105 No other positions

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.