*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Barley-Barley, OPA123-2008, Consensus
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Hordeum-OPA123-2008-3H
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Barley - Barley, OPA123-2008, Consensus [ View Map Set Info ]
Map Name: Hordeum-OPA123-2008-3H
Map Start: 0
Map Stop: 173.17
Features by Type:
475 locus
475 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 76 to 100 of 475.       Previous | of 19 | Next
Barley - Barley, OPA123-2008, Consensus - Hordeum-OPA123-2008-3H
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
POPA1_1172 locus 126.27 Barley - Barley, OPA 2011, Consensus - Hordeum-OPAConsensus-2011-3H POPA1_1172 locus 134.71 () Automated name-based View Maps
Barley - Barley, OPA 2009, Consensus - Hordeum-OPA-2009-3H POPA1_1172 locus 126.27 () Automated name-based View Maps
Barley - Barley, 2012 9KSNP - Barley, 2012 9KSNP 3H POPA1_1172 locus 108.4 () Automated name-based View Maps
POPA1_1191 locus 64.19 Barley - Barley, OWB, OPA2008 - Hordeum-OWB-OPA2008-3H POPA1_1191 locus 70.63 () Automated name-based View Maps
Barley - Barley, 2012 9KSNP - Barley, 2012 9KSNP 3H POPA1_1191 locus 55.8 () Automated name-based View Maps
Barley - Barley, OPA 2011, Consensus - Hordeum-OPAConsensus-2011-3H POPA1_1191 locus 75.27 () Automated name-based View Maps
Barley - Barley, OPA 2009, Consensus - Hordeum-OPA-2009-3H POPA1_1191 locus 64.19 () Automated name-based View Maps
POPA1_1196 locus 130.82 Barley - Barley, OPA 2009, Consensus - Hordeum-OPA-2009-3H POPA1_1196 locus 130.82 () Automated name-based View Maps
Barley - Barley, OWB, OPA2008 - Hordeum-OWB-OPA2008-3H POPA1_1196 locus 154.84 () Automated name-based View Maps
Barley - Barley, OPA 2011, Consensus - Hordeum-OPAConsensus-2011-3H POPA1_1196 locus 138.39 () Automated name-based View Maps
POPA1_1241 locus 70.71 Barley - Barley, OPA 2009, Consensus - Hordeum-OPA-2009-3H POPA1_1241 locus 70.71 () Automated name-based View Maps
Barley - Barley, OPA 2011, Consensus - Hordeum-OPAConsensus-2011-3H POPA1_1241 locus 84.22 () Automated name-based View Maps
Barley - Barley, 2012 9KSNP - Barley, 2012 9KSNP 3H POPA1_1241 locus 61.9 () Automated name-based View Maps
POPA1_1258 locus 52.5 Barley - Barley, 2012 9KSNP - Barley, 2012 9KSNP 3H POPA1_1258 locus 50.9 () Automated name-based View Maps
Barley - Barley, OPA 2011, Consensus - Hordeum-OPAConsensus-2011-3H POPA1_1258 locus 63.94 () Automated name-based View Maps
Barley - Barley, OPA 2009, Consensus - Hordeum-OPA-2009-3H POPA1_1258 locus 52.5 () Automated name-based View Maps
POPA1_1283 locus 56.4 Barley - Barley, OPA 2011, Consensus - Hordeum-OPAConsensus-2011-3H POPA1_1283 locus 66.62 () Automated name-based View Maps
Barley - Barley, OPA 2009, Consensus - Hordeum-OPA-2009-3H POPA1_1283 locus 56.4 () Automated name-based View Maps
Barley - Barley, OWB, OPA2008 - Hordeum-OWB-OPA2008-3H POPA1_1283 locus 62.95 () Automated name-based View Maps
Barley - Barley, 2012 9KSNP - Barley, 2012 9KSNP 3H POPA1_1283 locus 51.6 () Automated name-based View Maps
POPA1_1313 locus 51.73 Barley - Barley, OPA 2011, Consensus - Hordeum-OPAConsensus-2011-3H POPA1_1313 locus 63.25 () Automated name-based View Maps
Barley - Barley, OPA 2009, Consensus - Hordeum-OPA-2009-3H POPA1_1313 locus 51.73 () Automated name-based View Maps
POPA1_1314 locus 70.23 Barley - Barley, OWB, OPA2008 - Hordeum-OWB-OPA2008-3H POPA1_1314 locus 76.14 () Automated name-based View Maps
Barley - Barley, OPA 2011, Consensus - Hordeum-OPAConsensus-2011-3H POPA1_1314 locus 83.16 () Automated name-based View Maps
Barley - Barley, OPA 2009, Consensus - Hordeum-OPA-2009-3H POPA1_1314 locus 70.23 () Automated name-based View Maps
POPA1_1328 locus 138.83 Barley - Barley, OPA 2011, Consensus - Hordeum-OPAConsensus-2011-3H POPA1_1328 locus 147.57 () Automated name-based View Maps
Barley - Barley, OWB, OPA2008 - Hordeum-OWB-OPA2008-3H POPA1_1328 locus 167.2 () Automated name-based View Maps
Barley - Barley, OPA 2009, Consensus - Hordeum-OPA-2009-3H POPA1_1328 locus 138.83 () Automated name-based View Maps
POPA1_1330 locus 120.59 Barley - Barley, OPA 2009, Consensus - Hordeum-OPA-2009-3H POPA1_1330 locus 120.59 () Automated name-based View Maps
Barley - Barley, 2012 9KSNP - Barley, 2012 9KSNP 3H POPA1_1330 locus 105.3 () Automated name-based View Maps
Barley - Barley, OWB, OPA2008 - Hordeum-OWB-OPA2008-3H POPA1_1330 locus 140.51 () Automated name-based View Maps
Barley - Barley, OPA 2011, Consensus - Hordeum-OPAConsensus-2011-3H POPA1_1330 locus 129.83 () Automated name-based View Maps
POPA1_1337 locus 56.4 Barley - Barley, OPA 2011, Consensus - Hordeum-OPAConsensus-2011-3H POPA1_1337 locus 67.27 () Automated name-based View Maps
Barley - Barley, OPA 2009, Consensus - Hordeum-OPA-2009-3H POPA1_1337 locus 56.4 () Automated name-based View Maps
Barley - Barley, OWB, OPA2008 - Hordeum-OWB-OPA2008-3H POPA1_1337 locus 62.95 () Automated name-based View Maps
POPA1_1391 locus 65.52 Barley - Barley, OPA 2009, Consensus - Hordeum-OPA-2009-3H POPA1_1391 locus 65.52 () Automated name-based View Maps
Barley - Barley, OPA 2011, Consensus - Hordeum-OPAConsensus-2011-3H POPA1_1391 locus 77.37 () Automated name-based View Maps
POPA1_1394 locus 69.6 Barley - Barley, OWB, OPA2008 - Hordeum-OWB-OPA2008-3H POPA1_1394 locus 76.14 () Automated name-based View Maps
Barley - Barley, 2012 9KSNP - Barley, 2012 9KSNP 3H POPA1_1394 locus 59.3 () Automated name-based View Maps
Barley - Barley, OPA 2009, Consensus - Hordeum-OPA-2009-3H POPA1_1394 locus 69.6 () Automated name-based View Maps
Barley - Barley, OPA 2011, Consensus - Hordeum-OPAConsensus-2011-3H POPA1_1394 locus 81.28 () Automated name-based View Maps
POPA1_1401 locus 58.01 Barley - Barley, OPA 2009, Consensus - Hordeum-OPA-2009-3H POPA1_1401 locus 58.01 () Automated name-based View Maps
Barley - Barley, OPA 2011, Consensus - Hordeum-OPAConsensus-2011-3H POPA1_1401 locus 69.05 () Automated name-based View Maps
POPA1_1410 locus 167.77 Barley - Barley, OPA 2011, Consensus - Hordeum-OPAConsensus-2011-3H POPA1_1410 locus 172.82 () Automated name-based View Maps
Barley - Barley, OPA 2009, Consensus - Hordeum-OPA-2009-3H POPA1_1410 locus 167.77 () Automated name-based View Maps
Barley - Barley, 2012 9KSNP - Barley, 2012 9KSNP 3H POPA1_1410 locus 145.4 () Automated name-based View Maps
POPA1_1436 locus 155.85 Barley - Barley, 2012 9KSNP - Barley, 2012 9KSNP 3H POPA1_1436 locus 139.6 () Automated name-based View Maps
Barley - Barley, OPA 2011, Consensus - Hordeum-OPAConsensus-2011-3H POPA1_1436 locus 163.49 () Automated name-based View Maps
Barley - Barley, OPA 2009, Consensus - Hordeum-OPA-2009-3H POPA1_1436 locus 155.85 () Automated name-based View Maps
Barley - Barley, OWB, OPA2008 - Hordeum-OWB-OPA2008-3H POPA1_1436 locus 187.19 () Automated name-based View Maps
POPA1_1453 locus 6.03 Barley - Barley, 2012 9KSNP - Barley, 2012 9KSNP 3H POPA1_1453 locus 2.4 () Automated name-based View Maps
Barley - Barley, OPA 2009, Consensus - Hordeum-OPA-2009-3H POPA1_1453 locus 6.03 () Automated name-based View Maps
Barley - Barley, OPA 2011, Consensus - Hordeum-OPAConsensus-2011-3H POPA1_1453 locus 8.56 () Automated name-based View Maps
Barley - Barley, OWB, OPA2008 - Hordeum-OWB-OPA2008-3H POPA1_1453 locus 8.82 () Automated name-based View Maps
POPA1_1501 locus 54.4 Barley - Barley, OPA 2009, Consensus - Hordeum-OPA-2009-3H POPA1_1501 locus 54.4 () Automated name-based View Maps
Barley - Barley, OPA 2011, Consensus - Hordeum-OPAConsensus-2011-3H POPA1_1501 locus 67.86 () Automated name-based View Maps
POPA1_1502 locus 54.4 Barley - Barley, OPA 2011, Consensus - Hordeum-OPAConsensus-2011-3H POPA1_1502 locus 67.86 () Automated name-based View Maps
Barley - Barley, OPA 2009, Consensus - Hordeum-OPA-2009-3H POPA1_1502 locus 54.4 () Automated name-based View Maps
POPA1_1503 locus 114 Barley - Barley, OPA 2011, Consensus - Hordeum-OPAConsensus-2011-3H POPA1_1503 locus 125.11 () Automated name-based View Maps
Barley - Barley, OPA 2009, Consensus - Hordeum-OPA-2009-3H POPA1_1503 locus 114 () Automated name-based View Maps
POPA1_1516 locus 169.32 Barley - Barley, OPA 2011, Consensus - Hordeum-OPAConsensus-2011-3H POPA1_1516 locus 174.99 () Automated name-based View Maps
Barley - Barley, OWB, OPA2008 - Hordeum-OWB-OPA2008-3H POPA1_1516 locus 201.47 () Automated name-based View Maps
Barley - Barley, OPA 2009, Consensus - Hordeum-OPA-2009-3H POPA1_1516 locus 169.32 () Automated name-based View Maps
POPA1_1530 locus 56.4 Barley - Barley, OPA 2011, Consensus - Hordeum-OPAConsensus-2011-3H POPA1_1530 locus 66.62 () Automated name-based View Maps
Barley - Barley, 2012 9KSNP - Barley, 2012 9KSNP 3H POPA1_1530 locus 51.6 () Automated name-based View Maps
Barley - Barley, OPA 2009, Consensus - Hordeum-OPA-2009-3H POPA1_1530 locus 56.4 () Automated name-based View Maps
Barley - Barley, OWB, OPA2008 - Hordeum-OWB-OPA2008-3H POPA1_1530 locus 62.95 () Automated name-based View Maps
POPA2_0002 locus 56.4 Barley - Barley, OPA 2009, Consensus - Hordeum-OPA-2009-3H POPA2_0002 locus 56.4 () Automated name-based View Maps
Barley - Barley, OPA 2011, Consensus - Hordeum-OPAConsensus-2011-3H POPA2_0002 locus 65.25 () Automated name-based View Maps
Barley - Barley, 2012 9KSNP - Barley, 2012 9KSNP 3H POPA2_0002 locus 51.6 () Automated name-based View Maps
POPA2_0009 locus 107.63 Barley - Barley, OPA 2009, Consensus - Hordeum-OPA-2009-3H POPA2_0009 locus 107.63 () Automated name-based View Maps
Barley - Barley, OPA 2011, Consensus - Hordeum-OPAConsensus-2011-3H POPA2_0009 locus 118.22 () Automated name-based View Maps
Barley - Barley, OWB, OPA2008 - Hordeum-OWB-OPA2008-3H POPA2_0009 locus 125.04 () Automated name-based View Maps
POPA2_0017 locus 69.6 Barley - Barley, OPA 2011, Consensus - Hordeum-OPAConsensus-2011-3H POPA2_0017 locus 82.62 () Automated name-based View Maps
Barley - Barley, OPA 2009, Consensus - Hordeum-OPA-2009-3H POPA2_0017 locus 69.6 () Automated name-based View Maps

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.