*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Barley-Barley, OPA123-2008, Consensus
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Hordeum-OPA123-2008-3H
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Barley - Barley, OPA123-2008, Consensus [ View Map Set Info ]
Map Name: Hordeum-OPA123-2008-3H
Map Start: 0
Map Stop: 173.17
Features by Type:
475 locus
475 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 51 to 75 of 475.       Previous | of 19 | Next
Barley - Barley, OPA123-2008, Consensus - Hordeum-OPA123-2008-3H
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
POPA1_0753 locus 114 Barley - Barley, 2012 9KSNP - Barley, 2012 9KSNP 3H POPA1_0753 locus 97.6 () Automated name-based View Maps
Barley - Barley, OPA 2009, Consensus - Hordeum-OPA-2009-3H POPA1_0753 locus 114 () Automated name-based View Maps
Barley - Barley, OPA 2011, Consensus - Hordeum-OPAConsensus-2011-3H POPA1_0753 locus 123.37 () Automated name-based View Maps
POPA1_0754 locus 126.27 Barley - Barley, 2012 9KSNP - Barley, 2012 9KSNP 3H POPA1_0754 locus 108.6 () Automated name-based View Maps
Barley - Barley, OPA 2011, Consensus - Hordeum-OPAConsensus-2011-3H POPA1_0754 locus 134.71 () Automated name-based View Maps
Barley - Barley, OPA 2009, Consensus - Hordeum-OPA-2009-3H POPA1_0754 locus 126.27 () Automated name-based View Maps
Barley - Barley, OWB, OPA2008 - Hordeum-OWB-OPA2008-3H POPA1_0754 locus 149.38 () Automated name-based View Maps
POPA1_0767 locus 172.42 Barley - Barley, OPA 2011, Consensus - Hordeum-OPAConsensus-2011-3H POPA1_0767 locus 179.16 () Automated name-based View Maps
Barley - Barley, OPA 2009, Consensus - Hordeum-OPA-2009-3H POPA1_0767 locus 172.42 () Automated name-based View Maps
POPA1_0821 locus 126.27 Barley - Barley, OWB, OPA2008 - Hordeum-OWB-OPA2008-3H POPA1_0821 locus 149.38 () Automated name-based View Maps
Barley - Barley, OPA 2009, Consensus - Hordeum-OPA-2009-3H POPA1_0821 locus 126.27 () Automated name-based View Maps
Barley - Barley, OPA 2011, Consensus - Hordeum-OPAConsensus-2011-3H POPA1_0821 locus 134.71 () Automated name-based View Maps
POPA1_0825 locus 39.45 Barley - Barley, 2012 9KSNP - Barley, 2012 9KSNP 3H POPA1_0825 locus 38 () Automated name-based View Maps
Barley - Barley, OPA 2009, Consensus - Hordeum-OPA-2009-3H POPA1_0825 locus 39.45 () Automated name-based View Maps
Barley - Barley, OPA 2011, Consensus - Hordeum-OPAConsensus-2011-3H POPA1_0825 locus 39.92 () Automated name-based View Maps
POPA1_0839 locus 65.52 Barley - Barley, OPA 2009, Consensus - Hordeum-OPA-2009-3H POPA1_0839 locus 65.52 () Automated name-based View Maps
Barley - Barley, OPA 2011, Consensus - Hordeum-OPAConsensus-2011-3H POPA1_0839 locus 77.37 () Automated name-based View Maps
POPA1_0842 locus 131.59 Barley - Barley, OPA 2011, Consensus - Hordeum-OPAConsensus-2011-3H POPA1_0842 locus 139 () Automated name-based View Maps
Barley - Barley, OWB, OPA2008 - Hordeum-OWB-OPA2008-3H POPA1_0842 locus 155.92 () Automated name-based View Maps
Barley - Barley, OPA 2009, Consensus - Hordeum-OPA-2009-3H POPA1_0842 locus 131.59 () Automated name-based View Maps
POPA1_0863 locus 41.68 Barley - Barley, OPA 2009, Consensus - Hordeum-OPA-2009-3H POPA1_0863 locus 41.68 () Automated name-based View Maps
Barley - Barley, OPA 2011, Consensus - Hordeum-OPAConsensus-2011-3H POPA1_0863 locus 42.31 () Automated name-based View Maps
POPA1_0867 locus 127.1 Barley - Barley, OPA 2009, Consensus - Hordeum-OPA-2009-3H POPA1_0867 locus 127.1 () Automated name-based View Maps
Barley - Barley, OPA 2011, Consensus - Hordeum-OPAConsensus-2011-3H POPA1_0867 locus 135.43 () Automated name-based View Maps
Barley - Barley, 2012 9KSNP - Barley, 2012 9KSNP 3H POPA1_0867 locus 109.2 () Automated name-based View Maps
POPA1_0886 locus 10.8 Barley - Barley, OPA 2011, Consensus - Hordeum-OPAConsensus-2011-3H POPA1_0886 locus 13.78 () Automated name-based View Maps
Barley - Barley, OPA 2009, Consensus - Hordeum-OPA-2009-3H POPA1_0886 locus 10.8 () Automated name-based View Maps
Barley - Barley, 2012 9KSNP - Barley, 2012 9KSNP 3H POPA1_0886 locus 8.3 () Automated name-based View Maps
Barley - Barley, OWB, OPA2008 - Hordeum-OWB-OPA2008-3H POPA1_0886 locus 14.3 () Automated name-based View Maps
POPA1_0893 locus 167.77 Barley - Barley, OWB, OPA2008 - Hordeum-OWB-OPA2008-3H POPA1_0893 locus 196.01 () Automated name-based View Maps
Barley - Barley, 2012 9KSNP - Barley, 2012 9KSNP 3H POPA1_0893 locus 146.1 () Automated name-based View Maps
Barley - Barley, OPA 2009, Consensus - Hordeum-OPA-2009-3H POPA1_0893 locus 167.77 () Automated name-based View Maps
Barley - Barley, OPA 2011, Consensus - Hordeum-OPAConsensus-2011-3H POPA1_0893 locus 172.82 () Automated name-based View Maps
POPA1_0918 locus 123.68 Barley - Barley, OPA 2011, Consensus - Hordeum-OPAConsensus-2011-3H POPA1_0918 locus 132.62 () Automated name-based View Maps
Barley - Barley, OPA 2009, Consensus - Hordeum-OPA-2009-3H POPA1_0918 locus 123.68 () Automated name-based View Maps
Barley - Barley, OWB, OPA2008 - Hordeum-OWB-OPA2008-3H POPA1_0918 locus 143.79 () Automated name-based View Maps
POPA1_0925 locus 56.4 Barley - Barley, OWB, OPA2008 - Hordeum-OWB-OPA2008-3H POPA1_0925 locus 62.95 () Automated name-based View Maps
Barley - Barley, 2012 9KSNP - Barley, 2012 9KSNP 3H POPA1_0925 locus 51.6 () Automated name-based View Maps
Barley - Barley, OPA 2011, Consensus - Hordeum-OPAConsensus-2011-3H POPA1_0925 locus 66.62 () Automated name-based View Maps
Barley - Barley, OPA 2009, Consensus - Hordeum-OPA-2009-3H POPA1_0925 locus 56.4 () Automated name-based View Maps
POPA1_0926 locus 56.4 Barley - Barley, OPA 2009, Consensus - Hordeum-OPA-2009-3H POPA1_0926 locus 56.4 () Automated name-based View Maps
Barley - Barley, OPA 2011, Consensus - Hordeum-OPAConsensus-2011-3H POPA1_0926 locus 67.86 () Automated name-based View Maps
POPA1_0935 locus 160.08 Barley - Barley, OPA 2009, Consensus - Hordeum-OPA-2009-3H POPA1_0935 locus 160.08 () Automated name-based View Maps
Barley - Barley, OWB, OPA2008 - Hordeum-OWB-OPA2008-3H POPA1_0935 locus 192.72 () Automated name-based View Maps
Barley - Barley, OPA 2011, Consensus - Hordeum-OPAConsensus-2011-3H POPA1_0935 locus 167.33 () Automated name-based View Maps
POPA1_0966 locus 56.4 Barley - Barley, OPA 2009, Consensus - Hordeum-OPA-2009-3H POPA1_0966 locus 56.4 () Automated name-based View Maps
Barley - Barley, 2012 9KSNP - Barley, 2012 9KSNP 3H POPA1_0966 locus 51.6 () Automated name-based View Maps
Barley - Barley, OPA 2011, Consensus - Hordeum-OPAConsensus-2011-3H POPA1_0966 locus 65.25 () Automated name-based View Maps
POPA1_1002 locus 43.99 Barley - Barley, OPA 2009, Consensus - Hordeum-OPA-2009-3H POPA1_1002 locus 43.99 () Automated name-based View Maps
Barley - Barley, 2012 9KSNP - Barley, 2012 9KSNP 3H POPA1_1002 locus 43.1 () Automated name-based View Maps
Barley - Barley, OPA 2011, Consensus - Hordeum-OPAConsensus-2011-3H POPA1_1002 locus 48.02 () Automated name-based View Maps
POPA1_1016 locus 58.64 Barley - Barley, OPA 2009, Consensus - Hordeum-OPA-2009-3H POPA1_1016 locus 58.64 () Automated name-based View Maps
Barley - Barley, OPA 2011, Consensus - Hordeum-OPAConsensus-2011-3H POPA1_1016 locus 71.26 () Automated name-based View Maps
POPA1_1021 locus 93.43 Barley - Barley, OPA 2009, Consensus - Hordeum-OPA-2009-3H POPA1_1021 locus 93.43 () Automated name-based View Maps
Barley - Barley, OPA 2011, Consensus - Hordeum-OPAConsensus-2011-3H POPA1_1021 locus 104.15 () Automated name-based View Maps
Barley - Barley, OWB, OPA2008 - Hordeum-OWB-OPA2008-3H POPA1_1021 locus 103.81 () Automated name-based View Maps
Barley - Barley, 2012 9KSNP - Barley, 2012 9KSNP 3H POPA1_1021 locus 77.7 () Automated name-based View Maps
POPA1_1086 locus 53.27 Barley - Barley, OPA 2009, Consensus - Hordeum-OPA-2009-3H POPA1_1086 locus 53.27 () Automated name-based View Maps
Barley - Barley, 2012 9KSNP - Barley, 2012 9KSNP 3H POPA1_1086 locus 51.2 () Automated name-based View Maps
Barley - Barley, OPA 2011, Consensus - Hordeum-OPAConsensus-2011-3H POPA1_1086 locus 64.6 () Automated name-based View Maps
POPA1_1099 locus 54.4 Barley - Barley, OPA 2009, Consensus - Hordeum-OPA-2009-3H POPA1_1099 locus 54.4 () Automated name-based View Maps
Barley - Barley, OWB, OPA2008 - Hordeum-OWB-OPA2008-3H POPA1_1099 locus 62.95 () Automated name-based View Maps
Barley - Barley, OPA 2011, Consensus - Hordeum-OPAConsensus-2011-3H POPA1_1099 locus 67.27 () Automated name-based View Maps
POPA1_1124 locus 56.4 Barley - Barley, OPA 2009, Consensus - Hordeum-OPA-2009-3H POPA1_1124 locus 56.4 () Automated name-based View Maps
Barley - Barley, OPA 2011, Consensus - Hordeum-OPAConsensus-2011-3H POPA1_1124 locus 67.86 () Automated name-based View Maps
POPA1_1125 locus 56.4 Barley - Barley, OPA 2009, Consensus - Hordeum-OPA-2009-3H POPA1_1125 locus 56.4 () Automated name-based View Maps
Barley - Barley, OWB, OPA2008 - Hordeum-OWB-OPA2008-3H POPA1_1125 locus 62.95 () Automated name-based View Maps
Barley - Barley, OPA 2011, Consensus - Hordeum-OPAConsensus-2011-3H POPA1_1125 locus 66.62 () Automated name-based View Maps
Barley - Barley, 2012 9KSNP - Barley, 2012 9KSNP 3H POPA1_1125 locus 51.6 () Automated name-based View Maps
POPA1_1127 locus 136.66 Barley - Barley, OPA 2011, Consensus - Hordeum-OPAConsensus-2011-3H POPA1_1127 locus 145.84 () Automated name-based View Maps
Barley - Barley, OPA 2009, Consensus - Hordeum-OPA-2009-3H POPA1_1127 locus 136.66 () Automated name-based View Maps
POPA1_1141 locus 130.82 Barley - Barley, OWB, OPA2008 - Hordeum-OWB-OPA2008-3H POPA1_1141 locus 154.84 () Automated name-based View Maps
Barley - Barley, OPA 2009, Consensus - Hordeum-OPA-2009-3H POPA1_1141 locus 130.82 () Automated name-based View Maps
Barley - Barley, OPA 2011, Consensus - Hordeum-OPAConsensus-2011-3H POPA1_1141 locus 137.74 () Automated name-based View Maps

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.