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Map Set Barley-Barley, OPA123-2008, Consensus
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Barley - Barley, OPA123-2008, Consensus [ View Map Set Info ]
Map Name: Hordeum-OPA123-2008-7H
Map Start: 0
Map Stop: 166.56
Features by Type:
417 locus
417 Total

Map Features

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Items 51 to 75 of 417.       Previous | of 17 | Next
Barley - Barley, OPA123-2008, Consensus - Hordeum-OPA123-2008-7H
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Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
POPA1_0920 locus 31.75 Barley - Barley, OPA 2009, Consensus - Hordeum-OPA-2009-7H POPA1_0920 locus 31.75 () Automated name-based View Maps
Barley - Barley, OPA 2011, Consensus - Hordeum-OPAConsensus-2011-7H POPA1_0920 locus 26.14 () Automated name-based View Maps
POPA1_0924 locus 77.85 Barley - Barley, 2012 9KSNP - Barley, 2012 9KSNP 7H POPA1_0924 locus 70.2 () Automated name-based View Maps
Barley - Barley, OPA 2011, Consensus - Hordeum-OPAConsensus-2011-7H POPA1_0924 locus 80.64 () Automated name-based View Maps
Barley - Barley, OWB, OPA2008 - Hordeum-OWB-OPA2008-7H POPA1_0924 locus 80.66 () Automated name-based View Maps
Barley - Barley, OPA 2009, Consensus - Hordeum-OPA-2009-7H POPA1_0924 locus 77.85 () Automated name-based View Maps
POPA1_0949 locus 0 Barley - Barley, OPA 2009, Consensus - Hordeum-OPA-2009-7H POPA1_0949 locus 0 () Automated name-based View Maps
Barley - Barley, OPA 2011, Consensus - Hordeum-OPAConsensus-2011-7H POPA1_0949 locus 0 () Automated name-based View Maps
POPA1_0965 locus 29.82 Barley - Barley, OPA 2011, Consensus - Hordeum-OPAConsensus-2011-7H POPA1_0965 locus 24.15 () Automated name-based View Maps
Barley - Barley, OWB, OPA2008 - Hordeum-OWB-OPA2008-7H POPA1_0965 locus 29.66 () Automated name-based View Maps
Barley - Barley, OPA 2009, Consensus - Hordeum-OPA-2009-7H POPA1_0965 locus 29.82 () Automated name-based View Maps
Barley - Barley, 2012 9KSNP - Barley, 2012 9KSNP 7H POPA1_0965 locus 23.3 () Automated name-based View Maps
POPA1_0971 locus 0 Barley - Barley, OPA 2011, Consensus - Hordeum-OPAConsensus-2011-7H POPA1_0971 locus 0 () Automated name-based View Maps
Barley - Barley, OPA 2009, Consensus - Hordeum-OPA-2009-7H POPA1_0971 locus 0 () Automated name-based View Maps
POPA1_0983 locus 74.52 Barley - Barley, OWB, OPA2008 - Hordeum-OWB-OPA2008-7H POPA1_0983 locus 75.18 () Automated name-based View Maps
Barley - Barley, OPA 2009, Consensus - Hordeum-OPA-2009-7H POPA1_0983 locus 74.52 () Automated name-based View Maps
Barley - Barley, OPA 2011, Consensus - Hordeum-OPAConsensus-2011-7H POPA1_0983 locus 73.54 () Automated name-based View Maps
POPA1_0999 locus 161.43 Barley - Barley, OPA 2009, Consensus - Hordeum-OPA-2009-7H POPA1_0999 locus 161.43 () Automated name-based View Maps
Barley - Barley, OPA 2011, Consensus - Hordeum-OPAConsensus-2011-7H POPA1_0999 locus 157.44 () Automated name-based View Maps
POPA1_1012 locus 147.47 Barley - Barley, OPA 2011, Consensus - Hordeum-OPAConsensus-2011-7H POPA1_1012 locus 149.31 () Automated name-based View Maps
Barley - Barley, OPA 2009, Consensus - Hordeum-OPA-2009-7H POPA1_1012 locus 147.47 () Automated name-based View Maps
POPA1_1014 locus 60.69 Barley - Barley, OPA 2011, Consensus - Hordeum-OPAConsensus-2011-7H POPA1_1014 locus 54.32 () Automated name-based View Maps
Barley - Barley, OPA 2009, Consensus - Hordeum-OPA-2009-7H POPA1_1014 locus 60.69 () Automated name-based View Maps
POPA1_1028 locus 71.1 Barley - Barley, OPA 2011, Consensus - Hordeum-OPAConsensus-2011-7H POPA1_1028 locus 65.98 () Automated name-based View Maps
Barley - Barley, OPA 2009, Consensus - Hordeum-OPA-2009-7H POPA1_1028 locus 71.1 () Automated name-based View Maps
Barley - Barley, OWB, OPA2008 - Hordeum-OWB-OPA2008-7H POPA1_1028 locus 69.67 () Automated name-based View Maps
POPA1_1031 locus 5.52 Barley - Barley, OPA 2009, Consensus - Hordeum-OPA-2009-7H POPA1_1031 locus 5.52 () Automated name-based View Maps
Barley - Barley, OWB, OPA2008 - Hordeum-OWB-OPA2008-7H POPA1_1031 locus 6.52 () Automated name-based View Maps
Barley - Barley, 2012 9KSNP - Barley, 2012 9KSNP 7H POPA1_1031 locus 4.1 () Automated name-based View Maps
Barley - Barley, OPA 2011, Consensus - Hordeum-OPAConsensus-2011-7H POPA1_1031 locus 5.96 () Automated name-based View Maps
POPA1_1068 locus 37.55 Barley - Barley, OPA 2011, Consensus - Hordeum-OPAConsensus-2011-7H POPA1_1068 locus 31.35 () Automated name-based View Maps
Barley - Barley, OPA 2009, Consensus - Hordeum-OPA-2009-7H POPA1_1068 locus 37.55 () Automated name-based View Maps
POPA1_1098 locus 68.46 Barley - Barley, OPA 2009, Consensus - Hordeum-OPA-2009-7H POPA1_1098 locus 68.46 () Automated name-based View Maps
Barley - Barley, OPA 2011, Consensus - Hordeum-OPAConsensus-2011-7H POPA1_1098 locus 64.98 () Automated name-based View Maps
POPA1_1122 locus 73.75 Barley - Barley, OPA 2009, Consensus - Hordeum-OPA-2009-7H POPA1_1122 locus 73.75 () Automated name-based View Maps
Barley - Barley, OPA 2011, Consensus - Hordeum-OPAConsensus-2011-7H POPA1_1122 locus 79.79 () Automated name-based View Maps
Barley - Barley, 2012 9KSNP - Barley, 2012 9KSNP 7H POPA1_1122 locus 68.4 () Automated name-based View Maps
POPA1_1132 locus 0.62 Barley - Barley, OWB, OPA2008 - Hordeum-OWB-OPA2008-7H POPA1_1132 locus 1.09 () Automated name-based View Maps
Barley - Barley, OPA 2011, Consensus - Hordeum-OPAConsensus-2011-7H POPA1_1132 locus 0.63 () Automated name-based View Maps
Barley - Barley, OPA 2009, Consensus - Hordeum-OPA-2009-7H POPA1_1132 locus 0.62 () Automated name-based View Maps
POPA1_1145 locus 79.6 Barley - Barley, OPA 2009, Consensus - Hordeum-OPA-2009-7H POPA1_1145 locus 79.6 () Automated name-based View Maps
Barley - Barley, OWB, OPA2008 - Hordeum-OWB-OPA2008-7H POPA1_1145 locus 80.66 () Automated name-based View Maps
Barley - Barley, 2012 9KSNP - Barley, 2012 9KSNP 7H POPA1_1145 locus 71 () Automated name-based View Maps
Barley - Barley, OPA 2011, Consensus - Hordeum-OPAConsensus-2011-7H POPA1_1145 locus 81.78 () Automated name-based View Maps
POPA1_1179 locus 4.12 Barley - Barley, OPA 2011, Consensus - Hordeum-OPAConsensus-2011-7H POPA1_1179 locus 4.5 () Automated name-based View Maps
Barley - Barley, OWB, OPA2008 - Hordeum-OWB-OPA2008-7H POPA1_1179 locus 5.43 () Automated name-based View Maps
Barley - Barley, OPA 2009, Consensus - Hordeum-OPA-2009-7H POPA1_1179 locus 4.12 () Automated name-based View Maps
POPA1_1219 locus 79.6 Barley - Barley, OPA 2009, Consensus - Hordeum-OPA-2009-7H POPA1_1219 locus 79.6 () Automated name-based View Maps
Barley - Barley, OPA 2011, Consensus - Hordeum-OPAConsensus-2011-7H POPA1_1219 locus 82.2 () Automated name-based View Maps
POPA1_1239 locus 84.92 Barley - Barley, OPA 2011, Consensus - Hordeum-OPAConsensus-2011-7H POPA1_1239 locus 85.28 () Automated name-based View Maps
Barley - Barley, OPA 2009, Consensus - Hordeum-OPA-2009-7H POPA1_1239 locus 84.92 () Automated name-based View Maps
POPA1_1243 locus 122.07 Barley - Barley, OPA 2009, Consensus - Hordeum-OPA-2009-7H POPA1_1243 locus 122.07 () Automated name-based View Maps
Barley - Barley, OPA 2011, Consensus - Hordeum-OPAConsensus-2011-7H POPA1_1243 locus 121.36 () Automated name-based View Maps
Barley - Barley, OWB, OPA2008 - Hordeum-OWB-OPA2008-7H POPA1_1243 locus 134.53 () Automated name-based View Maps
POPA1_1275 locus 149.03 Barley - Barley, OWB, OPA2008 - Hordeum-OWB-OPA2008-7H POPA1_1275 locus 169.34 () Automated name-based View Maps
Barley - Barley, OPA 2009, Consensus - Hordeum-OPA-2009-7H POPA1_1275 locus 149.03 () Automated name-based View Maps
Barley - Barley, 2012 9KSNP - Barley, 2012 9KSNP 7H POPA1_1275 locus 132.6 () Automated name-based View Maps
Barley - Barley, OPA 2011, Consensus - Hordeum-OPAConsensus-2011-7H POPA1_1275 locus 151.76 () Automated name-based View Maps
POPA1_1291 locus 79.6 Barley - Barley, OWB, OPA2008 - Hordeum-OWB-OPA2008-7H POPA1_1291 locus 80.66 () Automated name-based View Maps
Barley - Barley, OPA 2011, Consensus - Hordeum-OPAConsensus-2011-7H POPA1_1291 locus 81.78 () Automated name-based View Maps
Barley - Barley, OPA 2009, Consensus - Hordeum-OPA-2009-7H POPA1_1291 locus 79.6 () Automated name-based View Maps
Barley - Barley, 2012 9KSNP - Barley, 2012 9KSNP 7H POPA1_1291 locus 71 () Automated name-based View Maps
POPA1_1348 locus 70.4 Barley - Barley, OPA 2009, Consensus - Hordeum-OPA-2009-7H POPA1_1348 locus 70.4 () Automated name-based View Maps
Barley - Barley, 2012 9KSNP - Barley, 2012 9KSNP 7H POPA1_1348 locus 64 () Automated name-based View Maps
Barley - Barley, OPA 2011, Consensus - Hordeum-OPAConsensus-2011-7H POPA1_1348 locus 64.98 () Automated name-based View Maps
POPA1_1352 locus 79.6 Barley - Barley, OPA 2009, Consensus - Hordeum-OPA-2009-7H POPA1_1352 locus 79.6 () Automated name-based View Maps
Barley - Barley, OPA 2011, Consensus - Hordeum-OPAConsensus-2011-7H POPA1_1352 locus 81.78 () Automated name-based View Maps
Barley - Barley, OWB, OPA2008 - Hordeum-OWB-OPA2008-7H POPA1_1352 locus 80.66 () Automated name-based View Maps
Barley - Barley, 2012 9KSNP - Barley, 2012 9KSNP 7H POPA1_1352 locus 71 () Automated name-based View Maps
POPA1_1440 locus 144.45 Barley - Barley, 2012 9KSNP - Barley, 2012 9KSNP 7H POPA1_1440 locus 129.7 () Automated name-based View Maps
Barley - Barley, OPA 2009, Consensus - Hordeum-OPA-2009-7H POPA1_1440 locus 144.45 () Automated name-based View Maps
Barley - Barley, OPA 2011, Consensus - Hordeum-OPAConsensus-2011-7H POPA1_1440 locus 146.27 () Automated name-based View Maps
Barley - Barley, OWB, OPA2008 - Hordeum-OWB-OPA2008-7H POPA1_1440 locus 164.97 () Automated name-based View Maps

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