*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Barley-Barley, OWB, OPA2008
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Hordeum-OWB-OPA2008-1H
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
locus
qtl
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Barley - Barley, OWB, OPA2008 [ View Map Set Info ]
Map Name: Hordeum-OWB-OPA2008-1H
Map Start: 0
Map Stop: 156.3
Features by Type:
252 locus
25 qtl
277 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 51 to 75 of 277.       Previous | of 12 | Next
Barley - Barley, OWB, OPA2008 - Hordeum-OWB-OPA2008-1H
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
MWG706A locus 112.05 Barley - Barley, Consensus 2005, SNP - Hordeum-Consensus2005-SNP-1H MWG706A locus 114.03 () Automated name-based View Maps
Barley - Barley, OWB, 2005 - Hordeum-OWB-2005-1H MWG706A locus 95.7 () Automated name-based View Maps
Barley - Barley, Abiotic QTL Consensus - Hordeum-QTLConsensus-Abiotic-1H MWG706A locus 114.03 () Automated name-based View Maps
Barley - Barley, physical - Hordeum-Physical-RFLP-1H MWG706A locus 114.3 () Automated name-based View Maps
Barley - Barley, OWB, 2004 - Hordeum-OWB-2004-1H MWG706A locus 99 () Automated name-based View Maps
Barley - Barley, OWB - Hordeum-OWB-1H MWG706A locus 98.2 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-1H MWG706A locus 101.5 () Automated name-based View Maps
Barley - Barley, OWB, SNP - Hordeum-OWB-SNP-1H MWG706A locus 98.35 () Automated name-based View Maps
Barley - Barley, Agronomic QTL Consensus - Hordeum-QTLConsensus-Agronomic-1 MWG706A locus 114.03 () Automated name-based View Maps
KFP170 locus 118.82 Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-1H KFP170 locus 106.9 () Automated name-based View Maps
Barley - Barley, OWB, 2005 - Hordeum-OWB-2005-1H KFP170 locus 101.2 () Automated name-based View Maps
Barley - Barley, OWB, 2004 - Hordeum-OWB-2004-1H KFP170 locus 104.6 () Automated name-based View Maps
JS10C locus 101.94 Barley - Barley, OWB, 2004 - Hordeum-OWB-2004-1H JS10C locus 88.9 () Automated name-based View Maps
Barley - Barley, OWB, 2005 - Hordeum-OWB-2005-1H JS10C locus 85.6 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-1H JS10C locus 95 () Automated name-based View Maps
BG369940 locus 62.09 Barley - Barley, OWB, 2005 - Hordeum-OWB-2005-1H BG369940 locus 61.2 () Automated name-based View Maps
Barley - Barley, OWB, 2004 - Hordeum-OWB-2004-1H BG369940 locus 61.8 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-1H BG369940 locus 64.8 () Automated name-based View Maps
bPb-0357 locus 52.13 Barley - Barley, Nure x Tremois - Hv-Nure/Tremois-1H bPb-0357 locus 40.3 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-1H bPb-0357 locus 55.9 () Automated name-based View Maps
scind00046 locus 25.52 Barley - Barley, B73xCPI - Barley, B73xCPI-1H scind00046.1Ha locus 19.9 () Automated name-based View Maps
Barley - Barley, Consensus 2005, SNP - Hordeum-Consensus2005-SNP-1H scind00046 locus 34.28 () Automated name-based View Maps
Barley - Barley, OWB, SNP - Hordeum-OWB-SNP-1H scind00046 locus 23.85 () Automated name-based View Maps
Barley - Barley, OWB, 2005 - Hordeum-OWB-2005-1H scind00046 locus 25.3 () Automated name-based View Maps
Barley - Barley, Agronomic QTL Consensus - Hordeum-QTLConsensus-Agronomic-1 scind00046 locus 34.28 () Automated name-based View Maps
Barley - Barley, Abiotic QTL Consensus - Hordeum-QTLConsensus-Abiotic-1H scind00046 locus 34.28 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-1H scind00046 locus 25.7 () Automated name-based View Maps
rBgMD locus 17.77 Barley - Barley, OWB, 2004 - Hordeum-OWB-2004-1H rBgMD locus 18.9 () Automated name-based View Maps
Barley - Barley, OWB, 2005 - Hordeum-OWB-2005-1H rBgMD locus 18.1 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-1H rBgMD locus 18 () Automated name-based View Maps
DsT-66 locus 7.86 Barley - Barley, OWB, 2005 - Hordeum-OWB-2005-1H DsT-66 locus 6.9 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-1H DsT-66 locus 3.7 () Automated name-based View Maps
KFP257B locus 143.13 Barley - Barley, BinMap 2005 - Hordeum-Bins-1H KFP257B locus 146 () Automated name-based View Maps
Barley - Barley, OWB, 2005 - Hordeum-OWB-2005-1H KFP257B locus 122 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-1H KFP257B locus 128.9 () Automated name-based View Maps
Barley - Barley, OWB, 2004 - Hordeum-OWB-2004-1H KFP257B locus 125.6 () Automated name-based View Maps
MWG837B locus 22.19 Barley - Barley, Agronomic QTL Consensus - Hordeum-QTLConsensus-Agronomic-1 MWG837B locus 29.03 () Automated name-based View Maps
Barley - Barley, OWB, 2005 - Hordeum-OWB-2005-1H MWG837B locus 22.5 () Automated name-based View Maps
Barley - Barley, OWB, 2004 - Hordeum-OWB-2004-1H MWG837B locus 23.2 () Automated name-based View Maps
Barley - Barley, BinMap 2005 - Hordeum-Bins-1H MWG837B locus 22 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-1H MWG837B locus 22 () Automated name-based View Maps
Barley - Barley, OWB, SNP - Hordeum-OWB-SNP-1H MWG837B locus 20.69 () Automated name-based View Maps
Barley - Barley, Abiotic QTL Consensus - Hordeum-QTLConsensus-Abiotic-1H MWG837B locus 29.03 () Automated name-based View Maps
Barley - Barley, OWB - Hordeum-OWB-1H MWG837B locus 21.2 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-1H MWG837B locus 19.29 () Automated name-based View Maps
Barley - Barley, Consensus 2005, SNP - Hordeum-Consensus2005-SNP-1H MWG837B locus 29.03 () Automated name-based View Maps
BCD098 locus 35.43 Barley - Barley, Pilot OPA1, Consensus - Hordeum-PilotOPA1-1H BCD098 locus 34.35 () Automated name-based View Maps
Barley - Barley, BinMap 2005 - Hordeum-Bins-1H BCD098 locus 39.7 () Automated name-based View Maps
Barley - Barley, OWB, 2005 - Hordeum-OWB-2005-1H BCD098 locus 35.9 () Automated name-based View Maps
Barley - Barley, OWB - Hordeum-OWB-1H BCD098 locus 36.3 () Automated name-based View Maps
Barley - Barley, Consensus 2005, SNP - Hordeum-Consensus2005-SNP-1H BCD098 locus 43.03 () Automated name-based View Maps
Barley - Barley, Agronomic QTL Consensus - Hordeum-QTLConsensus-Agronomic-1 BCD098 locus 43.03 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-1H BCD098 locus 37.32 () Automated name-based View Maps
Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-1H BCD098 locus 37.32 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-1H BCD098 locus 39 () Automated name-based View Maps
Barley - Barley, Abiotic QTL Consensus - Hordeum-QTLConsensus-Abiotic-1H BCD098 locus 43.03 () Automated name-based View Maps
Barley - Barley, FxS, FHB QTL - Hordeum-FxS-FHB-QTL-1H BCD098 locus 18.2 () Automated name-based View Maps
Barley - Barley, OWB, 2004 - Hordeum-OWB-2004-1H BCD098 locus 36.8 () Automated name-based View Maps
POPA3_1533 locus 17.77 Barley - Barley, OPA 2011, Consensus - Hordeum-OPAConsensus-2011-1H POPA3_1533 locus 11.35 () Automated name-based View Maps
Barley - Barley, OPA123-2008, Consensus - Hordeum-OPA123-2008-1H POPA3_1533 locus 10.67 () Automated name-based View Maps
Barley - Barley, USDA Core, 2014 Consensus - Barley-Core-2014_1H POPA3_1533 locus 12.67 () Automated name-based View Maps
Barley - Barley, OPA 2009, Consensus - Hordeum-OPA-2009-1H POPA3_1533 locus 10.67 () Automated name-based View Maps
POPA3_1532 locus 67.57 Barley - Barley, OPA123-2008, Consensus - Hordeum-OPA123-2008-1H POPA3_1532 locus 60.77 () Automated name-based View Maps
Barley - Barley, OPA 2009, Consensus - Hordeum-OPA-2009-1H POPA3_1532 locus 60.77 () Automated name-based View Maps
POPA3_1191 locus 57.71 Barley - Barley, USDA Core, 2014 Consensus - Barley-Core-2014_1H POPA3_1191 locus 50 () Automated name-based View Maps
Barley - Barley, OPA 2009, Consensus - Hordeum-OPA-2009-1H POPA3_1191 locus 49.7 () Automated name-based View Maps
Barley - Barley, OPA 2011, Consensus - Hordeum-OPAConsensus-2011-1H POPA3_1191 locus 42.42 () Automated name-based View Maps
Barley - Barley, OPA123-2008, Consensus - Hordeum-OPA123-2008-1H POPA3_1191 locus 49.7 () Automated name-based View Maps
POPA3_0803 locus 148.62 Barley - Barley, USDA Core, 2014 Consensus - Barley-Core-2014_1H POPA3_0803 locus 138.64 () Automated name-based View Maps
Barley - Barley, OPA123-2008, Consensus - Hordeum-OPA123-2008-1H POPA3_0803 locus 132.53 () Automated name-based View Maps
Barley - Barley, OPA 2011, Consensus - Hordeum-OPAConsensus-2011-1H POPA3_0803 locus 136.7 () Automated name-based View Maps
Barley - Barley, OPA 2009, Consensus - Hordeum-OPA-2009-1H POPA3_0803 locus 132.53 () Automated name-based View Maps
POPA3_0741 locus 62.09 Barley - Barley, USDA Core, 2014 Consensus - Barley-Core-2014_1H POPA3_0741 locus 51.86 () Automated name-based View Maps
Barley - Barley, OPA123-2008, Consensus - Hordeum-OPA123-2008-1H POPA3_0741 locus 55.49 () Automated name-based View Maps
Barley - Barley, OPA 2011, Consensus - Hordeum-OPAConsensus-2011-1H POPA3_0741 locus 48.99 () Automated name-based View Maps
Barley - Barley, OPA 2009, Consensus - Hordeum-OPA-2009-1H POPA3_0741 locus 55.49 () Automated name-based View Maps
POPA3_0258 locus 57.71 Barley - Barley, OPA123-2008, Consensus - Hordeum-OPA123-2008-1H POPA3_0258 locus 49.7 () Automated name-based View Maps
Barley - Barley, OPA 2009, Consensus - Hordeum-OPA-2009-1H POPA3_0258 locus 49.7 () Automated name-based View Maps
Barley - Barley, USDA Core, 2014 Consensus - Barley-Core-2014_1H POPA3_0258 locus 50 () Automated name-based View Maps
Barley - Barley, OPA 2011, Consensus - Hordeum-OPAConsensus-2011-1H POPA3_0258 locus 45.2 () Automated name-based View Maps
POPA2_0275 locus 1.09 No other positions
POPA1_1439 locus 101.94 No other positions
POPA1_0463 locus 78.59 Barley - Barley, OPA 2011, Consensus - Hordeum-OPAConsensus-2011-1H POPA1_0463 locus 71.81 () Automated name-based View Maps
Barley - Barley, USDA Core, 2014 Consensus - Barley-Core-2014_1H POPA1_0463 locus 70.22 () Automated name-based View Maps
POPA1_0339 locus 135.38 Barley - Barley, OPA 2009, Consensus - Hordeum-OPA-2009-1H POPA1_0339 locus 121.77 () Automated name-based View Maps
Barley - Barley, OPA 2011, Consensus - Hordeum-OPAConsensus-2011-1H POPA1_0339 locus 123.1 () Automated name-based View Maps
Barley - Barley, USDA Core, 2014 Consensus - Barley-Core-2014_1H POPA1_0339 locus 125.66 () Automated name-based View Maps
Barley - Barley, OPA123-2008, Consensus - Hordeum-OPA123-2008-1H POPA1_0339 locus 121.77 () Automated name-based View Maps
bPb-3756 locus 156.3 Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-1H bPb-3756 locus 138.2 () Automated name-based View Maps
Barley - Barley, Nure x Tremois - Hv-Nure/Tremois-1H bPb-3756 locus 116 () Automated name-based View Maps
Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-1H bPb-3756 locus 147.3 () Automated name-based View Maps
bPb-5014 locus 124.31 Barley - Barley, Nure x Tremois - Hv-Nure/Tremois-1H bPb-5014 locus 88.9 () Automated name-based View Maps
Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-1H bPb-5014 locus 116.5 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-1H bPb-5014 locus 113 () Automated name-based View Maps
bPb-2063 locus 124.31 Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-1H bPb-2063 locus 116 () Automated name-based View Maps
bPb-9108 locus 119.91 Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-1H bPb-9108 locus 107.9 () Automated name-based View Maps
Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-1H bPb-9108 locus 112 () Automated name-based View Maps
Barley - Barley, Nure x Tremois - Hv-Nure/Tremois-1H bPb-9108 locus 84.2 () Automated name-based View Maps

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.