*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Oat-Oat-2009-KxO
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Oat-2009-KxO_11_41_20_45
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
(Hide Advanced Menu)

Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Oat - Oat-2009-KxO [ View Map Set Info ]
Map Name: Oat-2009-KxO_11_41_20_45
Map Start: 0 cM
Map Stop: 106 cM
Features by Type:
138 locus
138 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 51 to 75 of 138.       Previous | of 6 | Next
Oat - Oat-2009-KxO - Oat-2009-KxO_11_41_20_45
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
UMN5112_2 locus 14 Oat - Oat-2016-Consensus - Oat-2016-Consensus-5 UMN5112_2 locus 130.9 () Automated name-based View Maps
Oat - Oat-2014-AB_QTL_KxO - Oat-2014-KxO_11 UMN5112_2 locus 101 (cM) Automated name-based View Maps
Oat - Oat-2013-KxO-RGA - RGA-2013_KO11_41_20 umn5112_2 locus 6 (cM) Automated name-based View Maps
Oat - Oat-2001-KxO - Oat-2001-KxO_11-41 UMN5112_2 locus 3.75 (cM) Automated name-based View Maps
Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg05 UMN5112_2 locus 130.9 () Automated name-based View Maps
Oat - Oat-2004-KxO-RGA - Oat-2004-KxO-RGA_KO11_41+20 umn5112_2 locus 10.35 (cM) Automated name-based View Maps
Oat - Oat, KxO, 2003 - Oat-KxO/2003-11_41+20 umn5112_2 locus 6.17 () Automated name-based View Maps
CDO1281 locus 14 Oat - Oat-2016-Consensus - Oat-2016-Consensus-5 CDO1281 locus 123.6 () Automated name-based View Maps
Diploid oat - Diploid Oat, Cornell2 - Avena-Sorrells-G Xcdo1281 locus 52.2 () Automated name-based View Maps
Oat - Oat-2001-KxO - Oat-2001-KxO_11-41 CDO1281 locus 3.75 (cM) Automated name-based View Maps
Oat - Oat, KxO, 2003 - Oat-KxO/2003-11_41+20 cdo1281 locus 8.16 () Automated name-based View Maps
Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg05 CDO1281 locus 123.6 () Automated name-based View Maps
PKABA1 locus 14 Barley - Barley, Agronomic QTL Consensus - Hordeum-QTLConsensus-Agronomic-2 pKABA1 locus 123.68 () Automated name-based View Maps
Barley - Barley, BinMap 2005 - Hordeum-Bins-2H pKABA1 locus 139.4 () Automated name-based View Maps
Wheat AB - T. turgidum, JK x Cham1, 2 - Tturgidum-JKxC2-2A Xpkaba1-2A locus 26 () Automated name-based View Maps
Barley - Barley, Steptoe x Morex, SNP - Hordeum-StMo-SNP-2H pKABA1 locus 123.98 () Automated name-based View Maps
Oat - Oat, KxO, 2003 - Oat-KxO/2003-11_41+20 pKABA1 locus 8.33 () Automated name-based View Maps
Barley - Barley, Abiotic QTL Consensus - Hordeum-QTLConsensus-Abiotic-2H pKABA1 locus 123.68 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-5 PKABA1 locus 125.1 () Automated name-based View Maps
Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg05 PKABA1 locus 125.1 () Automated name-based View Maps
Barley - Barley, Consensus 2005, SNP - Hordeum-Consensus2005-SNP-2H pKABA1 locus 123.68 () Automated name-based View Maps
CDO1436C locus 19 Oat - Oat-2001-KxO - Oat-2001-KxO_11-41 CDO1436C locus 7.5 (cM) Automated name-based View Maps
Oat - Oat, KxO, 2003 - Oat-KxO/2003-11_41+20 cdo1436c locus 10.1 () Automated name-based View Maps
Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg05 CDO1436C locus 123.2 () Automated name-based View Maps
Oat - Oat-2004-KxO-RGA - Oat-2004-KxO-RGA_KO11_41+20 cdo1436c locus 19.88 (cM) Automated name-based View Maps
Oat - Oat-2014-AB_QTL_KxO - Oat-2014-KxO_11 CDO1436C locus 86 (cM) Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-5 CDO1436C locus 123.2 () Automated name-based View Maps
Oat - Oat-2013-KxO-RGA - RGA-2013_KO11_41_20 cdo1436c locus 10 (cM) Automated name-based View Maps
opt-1032 locus 19 No other positions
opt-12680 locus 19 No other positions
opt-13153 locus 19 No other positions
opt-13497 locus 19 No other positions
opt-13620 locus 19 No other positions
opt-1568 locus 19 No other positions
opt-2998 locus 19 No other positions
opt-4069 locus 19 No other positions
opt-6877 locus 19 No other positions
opt-6877_c locus 22 No other positions
CDO1464 locus 22 Oat - Oat-2003-OglexMAM17-5 - Oat-2003-OglexMAM17-5_3 cdo1464 locus 14 (cM) Automated name-based View Maps
Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg05 CDO1464 locus 114.7 () Automated name-based View Maps
Oat - Oat-2003-OxM-QTL1 - Oat-2003-OxM-QTL1_7 cdo1464 locus 14 (cM) Automated name-based View Maps
Oat - Oat-2016-KxO - Oat-2016-KxO_22 CDO1464 locus 20.4 () Automated name-based View Maps
Oat - Oat-2013-KxO-RGA - RGA-2013_KO11_41_20 cdo1464 locus 17 (cM) Automated name-based View Maps
Oat - Oat-2001-KxO - Oat-2001-KxO_11-41 CDO1464 locus 12.5 (cM) Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-5 CDO1464 locus 114.7 () Automated name-based View Maps
Oat - Oat-2003-OglexMAM17-5 - Oat-2003-OglexMAM17-5_24 cdo1464 locus 14 (cM) Automated name-based View Maps
Oat - Oat, MxN, genetic 2005 - Oat-MxN_2005-17 cdo1464 locus 89.7 () Automated name-based View Maps
Oat - Oat-2004-KxO-RGA - Oat-2004-KxO-RGA_KO11_41+20 cdo1464 locus 24.59 (cM) Automated name-based View Maps
Oat - Oat, KxO, 2003 - Oat-KxO/2003-11_41+20 cdo1464 locus 16.8 () Automated name-based View Maps
Oat - Oat-2003-OglexMAM17-5 - Oat-2003-OglexMAM17-5_10 cdo1464 locus 14 (cM) Automated name-based View Maps
Oat - Oat-2010-MxN_PcQTL - Oat-2010-MxN_17 cdo1464 locus 82.1 (cM) Automated name-based View Maps
Oat - Oat-2004-OxM-QTL4 - Oat-2004-OxM-QTL4_3 cdo1464 locus 16.6 (cM) Automated name-based View Maps
Oat - Oat-2003-OglexMAM17-5 - Oat-2003-OglexMAM17-5_17 cdo1464 locus 14 (cM) Automated name-based View Maps
Oat - Oat-2014-AB_QTL_KxO - Oat-2014-KxO_11 CDO1464 locus 80 (cM) Automated name-based View Maps
Oat - Oat, KxO - Oat-KxO-11 Xcdo1464 locus 0 () Automated name-based View Maps
Oat - Oat-2013-MxN-RGA - Oat-2013-MxN-RGA_MN17 cdo1464 locus 82.1 (cM) Automated name-based View Maps
Oat - Oat-2003-OglexMAM17-5 - Oat-2003-OglexMAM17-5_3 cdo1464 locus 14 (cM) Automated name-based View Maps
re2m5_6x locus 22 Oat - Oat, KxO, 2003 - Oat-KxO/2003-11_41+20 re2m5_6x locus 13.7 () Automated name-based View Maps
opt-10163 locus 22 Oat - Oat-2012-Dal_x_Exeter - Oat-2012-DxE_13 oPt-10163 locus 80.53 (cM) Automated name-based View Maps
opt-17524 locus 22 Oat - Oat-2012-Dal_x_Exeter - Oat-2012-DxE_13 oPt-17524 locus 80.53 (cM) Automated name-based View Maps
opt-10163_c locus 27 No other positions
BCD880A locus 27 Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg05 BCD880A locus 114.7 () Automated name-based View Maps
Oat - Oat-2016-KxO - Oat-2016-KxO_9 BCD880A locus 120.2 () Automated name-based View Maps
Oat - Oat-2001-KxO - Oat-2001-KxO_11-41 BCD880A locus 12.5 (cM) Automated name-based View Maps
Oat - Oat, KxO, 2003 - Oat-KxO/2003-11_41+20 bcd880a locus 31.6 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-5 BCD880A locus 114.7 () Automated name-based View Maps
Wacacaa131 locus 27 Oat - Oat, KxO, 2003 - Oat-KxO/2003-11_41+20 Wacacaa131 locus 25.8 () Automated name-based View Maps
CDO836ARV locus 40 Oat - Oat, KxO, 2003 - Oat-KxO/2003-11_41+20 cdo836arv locus 30.2 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-5 CDO836ARV locus 116.9 () Automated name-based View Maps
Oat - Oat-2013-KxO-RGA - RGA-2013_KO11_41_20 cdo836arv locus 30 (cM) Automated name-based View Maps
Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg05 CDO836ARV locus 116.9 () Automated name-based View Maps
Oat - Oat-2014-AB_QTL_KxO - Oat-2014-KxO_11 CDO836ARV locus 57 (cM) Automated name-based View Maps
Oat - Oat-2004-KxO-RGA - Oat-2004-KxO-RGA_KO11_41+20 cdo836arv locus 41.18 (cM) Automated name-based View Maps
opt-10660_c locus 54 No other positions
OG19 locus 54 Oat - Oat-2016-Consensus - Oat-2016-Consensus-5 OG19 locus 100.4 () Automated name-based View Maps
Oat - Oat-2004-KxO-RGA - Oat-2004-KxO-RGA_KO11_41+20 og19 locus 55.41 (cM) Automated name-based View Maps
Oat - Oat-2013-KxO-RGA - RGA-2013_KO11_41_20 og19 locus 43 (cM) Automated name-based View Maps
Oat - Oat-2014-AB_QTL_KxO - Oat-2014-KxO_11 OG19 locus 42 (cM) Automated name-based View Maps
Oat - Oat-2016-KxO - Oat-2016-KxO_9 OG19 locus 102.8 () Automated name-based View Maps
Oat - Oat, KxO - Oat-KxO-20 Xog19 locus 40.6 () Automated name-based View Maps
Oat - Oat-2001-KxO - Oat-2001-KxO_11-41 OG19 locus 25 (cM) Automated name-based View Maps
Oat - Oat, KxO, 2003 - Oat-KxO/2003-11_41+20 og19 locus 42.7 () Automated name-based View Maps
Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg05 OG19 locus 100.4 () Automated name-based View Maps
Wacacaa179 locus 54 Oat - Oat-2001-KxO - Oat-2001-KxO_11-41 Wacacaa179 locus 25 (cM) Automated name-based View Maps
Oat - Oat-2001-KxM-QTL - Oat-2001-KxM-QTL_11-41 Wacacaa179 locus 10 (cM) Automated name-based View Maps
Oat - Oat, KxO, 2003 - Oat-KxO/2003-11_41+20 Wacacaa179 locus 44.8 () Automated name-based View Maps

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.