*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Oat-Oat-2009-KxO
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Oat-2009-KxO_15
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Oat - Oat-2009-KxO [ View Map Set Info ]
Map Name: Oat-2009-KxO_15
Map Start: 0 cM
Map Stop: 88 cM
Features by Type:
102 locus
102 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 26 to 50 of 102.       Previous | of 5 | Next
Oat - Oat-2009-KxO - Oat-2009-KxO_15
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
opt-14050 locus 27 No other positions
opt-14840 locus 27 No other positions
opt-2439 locus 27 No other positions
opt-4234_rp locus 27 No other positions
opt-6926 locus 27 No other positions
opt-8866 locus 35 No other positions
CDO1435C locus 35 Oat - Oat-2001-KxO - Oat-2001-KxO_15 CDO1435C locus 33.75 (cM) Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-15 CDO1435C locus 56.7 () Automated name-based View Maps
Oat - Oat-2001-KxM - Oat-2001-KxM_13 cdo1435c locus 15 () Automated name-based View Maps
Oat - Oat, KxO, 2003 - Oat-KxO/2003-15 cdo1435c locus 31.8 () Automated name-based View Maps
Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg15 CDO1435C locus 56.7 () Automated name-based View Maps
e1m6_20x locus 35 Oat - Oat, KxO, 2003 - Oat-KxO/2003-15 e1m6_20x locus 37.5 () Automated name-based View Maps
e8m3_4x locus 35 Oat - Oat, KxO, 2003 - Oat-KxO/2003-15 e8m3_4x locus 36.4 () Automated name-based View Maps
re1m6_13 locus 35 No other positions
re2m2_6 locus 35 Oat - Oat, KxO, 2003 - Oat-KxO/2003-15 re2m2_6 locus 36.9 () Automated name-based View Maps
Wacccac609 locus 35 Oat - Oat, KxO, 2003 - Oat-KxO/2003-15 Wacccac609 locus 36.1 () Automated name-based View Maps
opt-11190 locus 35 No other positions
opt-11190_c locus 35 No other positions
opt-15557 locus 35 No other positions
opt-15592 locus 35 No other positions
opt-15592_c locus 35 No other positions
UMN5214_3 locus 37 Oat - Oat-2016-KxO - Oat-2016-KxO_8 UMN5214_3 locus 74.8 () Automated name-based View Maps
Oat - Oat-2001-KxO - Oat-2001-KxO_15 UMN5214_3 locus 33.75 (cM) Automated name-based View Maps
Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg15 UMN5214_3 locus 47.6 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-15 UMN5214_3 locus 47.6 () Automated name-based View Maps
Oat - Oat-2013-KxO-RGA - RGA-2013_KO15 umn5214_3 locus 34 (cM) Automated name-based View Maps
Oat - Oat, KxO, 2003 - Oat-KxO/2003-15 umn5214_3 locus 33.9 () Automated name-based View Maps
opt-11075_c locus 47 No other positions
BCD115C locus 47 Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg15 BCD115C locus 23.6 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-15 BCD115C locus 23.6 () Automated name-based View Maps
Oat - Oat-2016-KxO - Oat-2016-KxO_8 BCD115C locus 102.6 () Automated name-based View Maps
Oat - Oat, KxO, 2003 - Oat-KxO/2003-15 bcd115c locus 50.6 () Automated name-based View Maps
e1m3_17x locus 47 Oat - Oat, KxO, 2003 - Oat-KxO/2003-15 e1m3_17x locus 59.1 () Automated name-based View Maps
e8m1_8x locus 47 Oat - Oat, KxO, 2003 - Oat-KxO/2003-15 e8m1_8x locus 45.2 () Automated name-based View Maps
UMN128 locus 47 Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg15 UMN128 locus 32.7 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-15 UMN128 locus 32.7 () Automated name-based View Maps
Oat - Oat, KxO - Oat-KxO-15 Xumn128 locus 64.3 () Automated name-based View Maps
Oat - Oat, KxO, 2003 - Oat-KxO/2003-15 umn128 locus 45.1 () Automated name-based View Maps
Oat - Oat-2001-KxO - Oat-2001-KxO_15 UMN128 locus 56.25 (cM) Automated name-based View Maps
opt-11075 locus 47 Oat - Oat-2012-Dal_x_Exeter - Oat-2012-DxE_8 oPt-11075 locus 0.03 (cM) Automated name-based View Maps
opt-13250 locus 47 Oat - Oat-2012-Dal_x_Exeter - Oat-2012-DxE_8 oPt-13250 locus 0 (cM) Automated name-based View Maps

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.