*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Oat-Oat-2018-Consensus
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Oat-2018-Consensus_Mrg15
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Oat - Oat-2018-Consensus [ View Map Set Info ]
Map Name: Oat-2018-Consensus_Mrg15
Map Start: -11.3
Map Stop: 94
Features by Type:
5,215 locus
5,215 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 51 to 75 of 5,215.       Previous | of 209 | Next
Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg15
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
avgbs_385621 locus 90.5 No other positions
avgbs_117840.1.29 locus 90.5 No other positions
avgbs_117840.1 locus 90.5 No other positions
avgbs_117840 locus 90.5 No other positions
avgbs_cluster_7725.1.7 locus 90.4 No other positions
avgbs_cluster_7725.1 locus 90.4 No other positions
BCD1823A locus 90.3 Oat - Oat-2016-Consensus - Oat-2016-Consensus-28 BCD1823A locus 58.8 () Automated name-based View Maps
Oat - Oat, OxT - Oat-OxT-11 bcd1823a locus 5.6 () Automated name-based View Maps
Oat - Oat-2001-KxO - Oat-2001-KxO_3-38 BCD1823A locus 91.25 (cM) Automated name-based View Maps
Oat - Oat-2003-OglexMAM17-5 - Oat-2003-OglexMAM17-5_13 bcd1823a locus 9 (cM) Automated name-based View Maps
Oat - Oat-2009-KxO - Oat-2009-KxO_1_3_38_X1 BCD1823A locus 0 (cM) Automated name-based View Maps
Oat - Oat, KxO, 2003 - Oat-KxO/2003-3+38 bcd1823a locus 106 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-15 BCD1823A locus 90.3 () Automated name-based View Maps
avgbs_236589 locus 90.2 Oat - Oat-2016-Consensus - Oat-2016-Consensus-15 avgbs_236589 locus 90.2 () Automated name-based View Maps
avgbs_75373 locus 90.1 No other positions
avgbs_122922 locus 90.1 Oat - Oat-2016-Consensus - Oat-2016-Consensus-15 avgbs_122922 locus 90.1 () Automated name-based View Maps
avgbs2_45649.1.8 locus 89.9 No other positions
avgbs2_45649.1 locus 89.9 No other positions
avgbs_cluster_8513.1.8 locus 89.9 No other positions
avgbs_cluster_8513.1 locus 89.9 No other positions
avgbs2_177333.1.49 locus 89.4 No other positions
avgbs2_177333.1 locus 89.4 No other positions
avgbs_cluster_36139.1.49 locus 89.4 No other positions
avgbs_cluster_36139.1 locus 89.4 No other positions
avgbs_68751 locus 89.2 Oat - Oat-2016-Consensus - Oat-2016-Consensus-15 avgbs_68751 locus 89.2 () Automated name-based View Maps
avgbs_cluster_12449.1.40 locus 88.9 No other positions
avgbs_cluster_12449.1 locus 88.9 No other positions
avgbs_218251 locus 88.7 Oat - Oat-2016-Consensus - Oat-2016-Consensus-15 avgbs_218251 locus 88.7 () Automated name-based View Maps
avgbs2_95612.1.18 locus 88.2 No other positions
avgbs2_95612.1 locus 88.2 No other positions
avgbs2_94785.1.33 locus 88.2 No other positions

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.