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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Rye-Rye, Lo7 x Lo225 600K
(Reference Set)
Min.
Correspondences
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Maps Rye, Lo7 x Lo225 600K 5R
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hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Rye - Rye, Lo7 x Lo225 600K [ View Map Set Info ]
Map Name: Rye, Lo7 x Lo225 600K 5R
Map Start: 0
Map Stop: 214.6
Features by Type:
13,382 locus
13,382 Total

Map Features

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Items 1 to 25 of 13,382.       of 536 | Next
Rye - Rye, Lo7 x Lo225 600K - Rye, Lo7 x Lo225 600K 5R
(Click headers to resort)		 Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
AX-99390216 locus 0 No other positions
AX-99284420 locus 0 No other positions
AX-99331051 locus 0 No other positions
AX-99262025 locus 0 No other positions
AX-99737976 locus 0 No other positions
AX-99312640 locus 0 No other positions
AX-99391698 locus 0 No other positions
AX-99757146 locus 0.4 No other positions
AX-99668593 locus 0.4 No other positions
AX-99787295 locus 0.4 No other positions
AX-99630437 locus 0.4 No other positions
AX-99478857 locus 0.4 No other positions
AX-99857532 locus 0.4 No other positions
AX-99690655 locus 2 No other positions
AX-99685284 locus 2 No other positions
AX-99287478 locus 2 No other positions
AX-99391125 locus 2.4 No other positions
AX-99287687 locus 2.4 No other positions
AX-99796219 locus 2.4 No other positions
AX-99595549 locus 2.8 No other positions
AX-99647156 locus 3.2 No other positions
AX-99359528 locus 3.2 No other positions
AX-99745822 locus 3.2 No other positions
AX-99711961 locus 3.2 No other positions
AX-99865663 locus 3.2 No other positions

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