*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat A-T. monococcum, DV92 x G3116
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Tm-Dubcovsky2-6A
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Wheat A - T. monococcum, DV92 x G3116 [ View Map Set Info ]
Map Name: Tm-Dubcovsky2-6A
Map Start: -65.10
Map Stop: 78.50
Features by Type:
34 locus
34 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 34.       of 2 | Next
Wheat A - T. monococcum, DV92 x G3116 - Tm-Dubcovsky2-6A
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
Centromere locus 0.00 Barley - 5HS, Steptoe x Morex - 5HS, Steptoe x Morex Centromere locus 0.00 () Automated name-based View Maps
Rye - Rye, Ds2 x RxL10 - Secale-Devos-4R Centromere locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-7D Centromere locus 79.00 () Automated name-based View Maps
Wheat ABD - Wheat genes - Triticum-Genes-4A Centromere locus 0.00 () Automated name-based View Maps
Wheat ABD - Triticeae consensus - Triticeae-Sorrells-1 Centromere locus 50.20 () Automated name-based View Maps
Wheat A - T. monococcum, DV92 x G3116 - Tm-Dubcovsky2-5A Centromere locus 0.00 () Automated name-based View Maps
Barley - Barley genes - Hordeum-Genes-4H Centromere locus 0.00 () Automated name-based View Maps
Wheat ABD - Triticum, CS-G1777 DS1A^m^(1A) RSL - TmTa-Dubcovsky-1A Centromere locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat, Gale - Ta-Gale-6D Centromere locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat genes - Triticum-Genes-2B Centromere locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat genes - Triticum-Genes-3A Centromere locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-4A Centromere locus 23.70 () Automated name-based View Maps
Wheat ABD - Wheat, Gale - Ta-Gale-7B Centromere locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat, Gale - Ta-Gale-7A Centromere locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat, Gale - Ta-Gale-3B Centromere locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat, Gale - Ta-Gale-2D Centromere locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat genes - Triticum-Genes-4D Centromere locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat, Gale - Ta-Gale-6B Centromere locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-4B Centromere locus 19.00 () Automated name-based View Maps
Wheat ABD - Wheat genes - Triticum-Genes-1B Centromere locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat, Gale - Ta-Gale-3A Centromere locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-5D Centromere locus 12.20 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-1B Centromere locus 36.40 () Automated name-based View Maps
Wheat ABD - Wheat, Gale - Ta-Gale-3D Centromere locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat, CS x CS-CNN DS1A - Ta-Dubcovsky-1A Centromere locus 0.00 () Automated name-based View Maps
Wheat A - T. monococcum, DV92 x G3116 - Tm-Dubcovsky2-2A Centromere locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat genes - Triticum-Genes-1A Centromere locus 0.00 () Automated name-based View Maps
Wheat A - T. monococcum, G1777 x G2528 - Tm-Dubcovsky-1A Centromere locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat, Gale - Ta-Gale-5B Centromere locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-2D Centromere locus 128.50 () Automated name-based View Maps
Wheat ABD - Wheat genes - Triticum-Genes-3B Centromere locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat genes - Triticum-Genes-2D Centromere locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-6B Centromere locus 0.00 () Automated name-based View Maps
Barley - Barley, physical - Hordeum-Physical-RFLP-3H Centromere locus 69.40 () Automated name-based View Maps
Barley - Barley, physical - Hordeum-Physical-RFLP-1H Centromere locus 62.00 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-5A Centromere locus 9.80 () Automated name-based View Maps
Wheat ABD - Wheat genes - Triticum-Genes-6A Centromere locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat, Gale - Ta-Gale-1A Centromere locus 0.00 () Automated name-based View Maps
Rye - Rye, Ds2 x RxL10 - Secale-Devos-3R Centromere locus 0.00 () Automated name-based View Maps
Barley - Barley, physical - Hordeum-Physical-RFLP-5H Centromere locus 38.90 () Automated name-based View Maps
Wheat ABD - Wheat genes - Triticum-Genes-5A Centromere locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-5B Centromere locus 28.20 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-1A Centromere locus 56.50 () Automated name-based View Maps
Barley - Barley, IxT - Hordeum-Laurie5-2H Centromere locus 59.00 () Automated name-based View Maps
Wheat A - 1AS, T.m. G1777 x G2528 - 1AS, T.m. G1777 x G2528 Centromere locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat genes - Triticum-Genes-3D Centromere locus 0.00 () Automated name-based View Maps
Barley - Barley, CxHs - Hordeum-Laurie2-2H Centromere locus 74.10 () Automated name-based View Maps
Wheat ABD - Wheat genes - Triticum-Genes-5D Centromere locus 0.00 () Automated name-based View Maps
Barley - Barley, BxGP - Hordeum-Laurie1-2H Centromere locus 58.60 () Automated name-based View Maps
Wheat ABD - Wheat, Gale - Ta-Gale-2A Centromere locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat genes - Triticum-Genes-7A Centromere locus 0.00 () Automated name-based View Maps
Wheat A - 5AS, T.m. G1777 x G2528 - 5AS, T.m. G1777 x G2528 Centromere locus 0.00 () Automated name-based View Maps
Wheat D - T.tauschii, Appels - Tt-Appels-1D Centromere locus 11.35 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-4D Centromere locus 52.20 () Automated name-based View Maps
Wheat ABD - Wheat, Gale - Ta-Gale-1B Centromere locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat genes - Triticum-Genes-6D Centromere locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat, Gale - Ta-Gale-5A Centromere locus 0.00 () Automated name-based View Maps
Wheat A - T. monococcum, DV92 x G3116 - Tm-Dubcovsky2-7A Centromere locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat genes - Triticum-Genes-1D Centromere locus 0.00 () Automated name-based View Maps
Wheat A - T. monococcum, DV92 x G3116 - Tm-Dubcovsky2-4A Centromere locus 0.00 () Automated name-based View Maps
Wheat A - T. monococcum, DV92 x G3116 - Tm-Dubcovsky2-3A Centromere locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat genes - Triticum-Genes-2A Centromere locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-2A Centromere locus 126.70 () Automated name-based View Maps
Rye - Rye, Ds2 x RxL10 - Secale-Devos-5R Centromere locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat genes - Triticum-Genes-6B Centromere locus 0.00 () Automated name-based View Maps
Wheat ABD - Triticeae consensus - Triticeae-Hart-6 Centromere locus 0.00 () Automated name-based View Maps
Wheat AB - 1BS, durum x dicoccoides - 1BS, durum x dicoccoides Centromere locus 0.00 () Automated name-based View Maps
Wheat ABD - Triticeae consensus - Triticeae-Sorrells-2 Centromere locus 129.00 () Automated name-based View Maps
Wheat ABD - 5DS, CS x RL5406 - 5DS, CS x RL5406 Centromere locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-2B Centromere locus 73.50 () Automated name-based View Maps
Wheat ABD - Wheat genes - Triticum-Genes-4B Centromere locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat, Gale - Ta-Gale-4D Centromere locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-3D Centromere locus 77.50 () Automated name-based View Maps
Wheat ABD - 1BS, CS x CNN - 1BS, CS x CNN Centromere locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-3B Centromere locus 87.00 () Automated name-based View Maps
Wheat ABD - Wheat, Gale - Ta-Gale-1D Centromere locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat, Gale - Ta-Gale-5D Centromere locus 0.00 () Automated name-based View Maps
Rye - Rye, Ds2 x RxL10 - Secale-Devos-2R Centromere locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat genes - Triticum-Genes-7B Centromere locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat, Gale - Ta-Gale-7D Centromere locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat, Gale - Ta-Gale-4A Centromere locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat genes - Triticum-Genes-5B Centromere locus 0.00 () Automated name-based View Maps
Wheat A - 5AS, T.m. G3116 x DV92 - 5AS, T.m. G3116 x DV92 Centromere locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat, Gale - Ta-Gale-6A Centromere locus 0.00 () Automated name-based View Maps
Rye - Rye, Ds2 x RxL10 - Secale-Devos-6R Centromere locus 0.00 () Automated name-based View Maps
Wheat ABD - Triticeae consensus - Triticeae-Sorrells-3 Centromere locus 60.10 () Automated name-based View Maps
Rye - Rye, Ds2 x RxL10 - Secale-Devos-7R Centromere locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-7A Centromere locus 121.90 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-1D Centromere locus 51.30 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-6A Centromere locus 0.00 () Automated name-based View Maps
Rye - Rye, Ds2 x RxL10 - Secale-Devos-1R Centromere locus 0.00 () Automated name-based View Maps
Wheat A - T. monococcum, DV92 x G3116 - Tm-Dubcovsky2-1A Centromere locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-6D Centromere locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-7B Centromere locus 38.50 () Automated name-based View Maps
Wheat ABD - Wheat genes - Triticum-Genes-7D Centromere locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat, Gale - Ta-Gale-4B Centromere locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat, Gale - Ta-Gale-2B Centromere locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-3A Centromere locus 58.00 () Automated name-based View Maps
Xpsr154 locus 27.90 Rye - Rye, Ds2 x RxL10 - Secale-Devos-6R Xpsr154 locus 16.50 () Automated name-based View Maps
Barley - H. bulbosum, PB1 x PB11 - Hbulbosum-PB1xPB11-6 Xpsr154 locus 75.00 () Automated name-based View Maps
Wheat ABD - Wheat, Physical - Ta-Physical-Gill-6ABD Xpsr154 locus 95.00 () Automated name-based, Automated name-based View Maps
Barley - Barley, IxT/QTL - Hordeum-IxT/Q-6H Xpsr154 locus 72.80 () Automated name-based View Maps
Rye - Rye_2009_consensus - Rye-2009-Consensus-6R Xpsr154 locus 61.40 () Automated name-based View Maps
Wheat D - T.tauschii, Appels - Tt-Appels-6D Xpsr154 locus 25.30 () Automated name-based View Maps
Rye - Rye, Ds2 x RxL10, RAPD - Secale-DxR-RAPD-6R Xpsr154 locus 85.60 () Automated name-based View Maps
Wheat ABD - Wheat, Physical - Ta-Physical-Gill-6D Xpsr154 locus 3.46 () Automated name-based, Automated name-based View Maps
Xpsr167 locus -65.10 Rye - Rye, P87 x P105 - Secale-PxP-4 Xpsr167 locus 163.70 () Automated name-based View Maps
Rye - Rye, Ds2 x RxL10 - Secale-Devos-4R Xpsr167 locus 77.40 () Automated name-based View Maps
Rye - Rye_2009_consensus - Rye-2009-Consensus-4R Xpsr167 locus 134.10 () Automated name-based View Maps
Wheat D - T.tauschii, Appels - Tt-Appels-6D Xpsr167 locus 1.45 () Automated name-based View Maps
Rye - Rye, Ds2 x RxL10, RAPD - Secale-DxR-RAPD-4R Xpsr167 locus 160.60 () Automated name-based View Maps
Rye - Rye, P87 x P105, update - Secale-PxP-update-4R Xpsr167 locus 164.70 () Automated name-based View Maps
Rye - Rye, Hannover - Secale-Wricke-4R Xpsr167 locus 111.10 () Automated name-based View Maps
Xmwg820-6A locus -6.40 Wheat AB - T. turgidum, durum x dicoccoides - Tturgidum-Du-6A Xmwg820-6A locus 10.50 () Automated name-based View Maps
XNar7-6A locus 12.20 Wheat AB - T. turgidum, durum x dicoccoides - Tturgidum-Du-6A XNar7-6A locus 21.10 () Automated name-based View Maps
Xpsr113 locus 0.00 No other positions
Xpsr371 locus 0.70 Wheat ABD - Wheat, Composite, 2004 - Wheat-Composite2004-6D Xpsr371 locus 87.00 () Automated name-based View Maps
Rye - Rye_2009_consensus - Rye-2009-Consensus-6R Xpsr371 locus 66.40 () Automated name-based View Maps
Rye - Rye, UC90 x E-line - Secale-UxE-6 Xpsr371 locus 66.80 () Automated name-based View Maps
Rye - Rye, Hannover - Secale-Wricke-6R Xpsr371 locus 22.70 () Automated name-based View Maps
Rye - Rye, ExR - Secale-ExR-6 Xpsr371 locus 5.10 () Automated name-based View Maps
Xpsr915 locus 1.40 Wheat ABD - Wheat, Composite, 2004 - Wheat-Composite2004-6A Xpsr915 locus 103.00 () Automated name-based View Maps
Rye - Rye_2009_consensus - Rye-2009-Consensus-6R Xpsr915 locus 75.70 () Automated name-based View Maps
Rye - Rye, ExR - Secale-ExR-6 Xpsr915 locus 18.00 () Automated name-based View Maps
Wheat ABD - Wheat, Composite, 2004 - Wheat-Composite2004-6B Xpsr915 locus 131.00 () Automated name-based View Maps
XksuG48 locus -27.10 Wheat ABD - Wheat, Physical - Ta-Physical-Gill-6D XksuG48 locus -3.05 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Physical - Ta-Physical-Gill-3ABD XksuG48 locus 82.00 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Physical - Ta-Physical-Gill-6ABD XksuG48 locus -86.00 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Physical - Ta-Physical-Gill-3D XksuG48 locus 2.94 () Automated name-based, Automated name-based View Maps
Wheat ABD - Wheat, Composite, 2004 - Wheat-Composite2004-6A XksuG48 locus 34.00 () Automated name-based View Maps
Xpsr899 locus -62.80 Rye - Rye, P87 x P105, update - Secale-PxP-update-4R Xpsr899 locus 156.30 () Automated name-based View Maps
Rye - Rye, Ds2 x RxL10 - Secale-Devos-4R Xpsr899 locus 81.00 () Automated name-based View Maps
Rye - Rye, Ds2 x RxL10, RAPD - Secale-DxR-RAPD-4R Xpsr899 locus 163.80 () Automated name-based View Maps
Rye - Rye_2009_consensus - Rye-2009-Consensus-4R Xpsr899 locus 127.10 () Automated name-based View Maps
Rye - Rye, P87 x P105 - Secale-PxP-4 Xpsr899 locus 156.20 () Automated name-based View Maps
Xabg466 locus -57.90 Wheat ABD - Wheat, Composite, 2004 - Wheat-Composite2004-6A Xabg466 locus 44.00 () Automated name-based View Maps
Wheat ABD - Wheat, Composite, 2004 - Wheat-Composite2004-6D Xabg466 locus 12.00 () Automated name-based View Maps
Xmwg573 locus -48.80 Rye - Rye_2009_consensus - Rye-2009-Consensus-4R Xmwg573 locus 46.70 () Automated name-based View Maps
Xpsr8(Cxp3) locus -32.60 Wheat ABD - Wheat, Composite, 2004 - Wheat-Composite2004-6A Xpsr8(Cxp3) locus 34.00 () Automated name-based View Maps
Wheat ABD - Wheat, Composite, 2004 - Wheat-Composite2004-6B Xpsr8(Cxp3) locus 120.00 () Automated name-based View Maps
Rye - Rye, Ds2 x RxL10 - Secale-Devos-4R Xpsr8(Cxp3) locus 55.50 () Automated name-based View Maps
Rye - Rye, Ds2 x RxL10, RAPD - Secale-DxR-RAPD-4R Xpsr8(Cxp3) locus 131.10 () Automated name-based View Maps
Xmwg652 locus -24.00 Wheat ABD - Wheat, Composite, 2004 - Wheat-Composite2004-6A Xmwg652 locus 43.00 () Automated name-based View Maps
Barley - H. bulbosum, PB1 x PB11 - Hbulbosum-PB1xPB11-6 Xmwg652 locus 48.00 () Automated name-based View Maps
Barley - Barley, IxT/QTL - Hordeum-IxT/Q-6H Xmwg652 locus -36.50 () Automated name-based View Maps
Gli2 locus -17.50 No other positions
Xabg458 locus -7.20 No other positions
XksuE3-6A locus -5.60 No other positions
Xucd109(Esi35) locus 0.00 No other positions
Xabg388 locus 1.40 No other positions
Xabc163 locus 1.40 No other positions
XAmy1-6A locus 15.90 No other positions
XDhn3 locus 23.70 No other positions
XksuG30-6A locus 23.70 No other positions
Xabc154 locus 27.90 No other positions
Xmwg813-6A locus 30.70 No other positions

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.