*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat ABD-Wheat, Avalon x Cadenza
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Wheat, Avalon x Cadenza 7D1
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
(Hide Advanced Menu)

Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Wheat ABD - Wheat, Avalon x Cadenza [ View Map Set Info ]
Map Name: Wheat, Avalon x Cadenza 7D1
Map Start: 0
Map Stop: 39.1
Features by Type:
9 locus
9 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 9 of 9.
Wheat ABD - Wheat, Avalon x Cadenza - Wheat, Avalon x Cadenza 7D1
(Click headers to resort)		 Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
s517TCAC locus 0 No other positions
s535ACAG locus 15 No other positions
Xpsp3113 locus 22.7 Wheat ABD - Wheat, Composite, 2004 - Wheat-Composite2004-7D Xpsp3113 locus 124 () Automated name-based View Maps
Xbarc172 locus 22.7 Wheat ABD - Wheat, Composite, 2004 - Wheat-Composite2004-7D Xbarc172 locus 148 () Automated name-based View Maps
Wheat ABD - Wheat, Nanda2419 x Wangshuibai - Ta-NxW-7D Xbarc172 locus 159.2 () Automated name-based View Maps
Wheat ABD - Wheat, Avalon x Cadenza - Wheat, Avalon x Cadenza 7B Xbarc172 locus 0 () Automated name-based View Maps
BS00009457 locus 24 Wheat ABD - Wheat_2017_LRC - Wheat_2017_LRC-7D BS00009457 locus 2.1 () Automated name-based View Maps
Xgwm437 locus 24.5 Wheat ABD - Wheat, Nanda2419 x Wangshuibai - Ta-NxW-7D Xgwm437 locus 139.9 () Automated name-based View Maps
Wheat ABD - Wheat, Composite, 2004 - Wheat-Composite2004-7D Xgwm437 locus 145 () Automated name-based View Maps
Xcfd21 locus 27.8 Wheat ABD - Wheat, Avalon x Cadenza - Wheat, Avalon x Cadenza 1D Xcfd21 locus 38 () Automated name-based View Maps
wPt-4555 locus 37.7 Wheat ABD - Wheat, Yr Update, 2021 - Wheat_Yr_2021-7D wPt-4555 locus 156.97 (cM) Automated name-based View Maps
Wheat ABD - Wheat, Axiom 2018, Consensus - Wheat-Axiom2018-Cons-7D AX-94764986 locus (cM) Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 7D wPt-4555 locus 65.1 () Automated name-based View Maps
Xwmc150 locus 39.1 Wheat ABD - Wheat, Nanda2419 x Wangshuibai - Ta-NxW-5A Xwmc150 locus 70.1 () Automated name-based View Maps
Wheat ABD - Wheat, Avalon x Cadenza - Wheat, Avalon x Cadenza 5A1 Xwmc150 locus 76 () Automated name-based View Maps

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.