*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat ABD-Wheat, Gale
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Ta-Gale-1D
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
baccontig
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Wheat ABD - Wheat, Gale [ View Map Set Info ]
Map Name: Ta-Gale-1D
Map Start: -45.4
Map Stop: 79.9
Features by Type:
10 baccontig
50 locus
60 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 26 to 50 of 60.       Previous | of 3 | Next
Wheat ABD - Wheat, Gale - Ta-Gale-1D
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
Gpi-1 locus -27.4 Wheat ABD - Wheat, Gale - Ta-Gale-1B Gpi-1 locus -27.4 () Automated name-based View Maps
Wheat ABD - Wheat, Gale - Ta-Gale-1A Gpi-1 locus -27.4 () Automated name-based View Maps
Rye - Rye, Ds2 x RxL10 - Secale-Devos-1R Gpi-1 locus -37 () Automated name-based View Maps
Rye - Rye, Ds2 x RxL10, RAPD - Secale-DxR-RAPD-1R Gpi-1 locus 30.7 () Automated name-based View Maps
Glu-1 locus 25.6 Wheat ABD - Wheat, Gale - Ta-Gale-1A Glu-1 locus 25.6 () Automated name-based View Maps
Rye - Rye, Ds2 x RxL10, RAPD - Secale-DxR-RAPD-1R Glu-1 locus 78.2 () Automated name-based View Maps
Wheat ABD - Wheat, Gale - Ta-Gale-1B Glu-1 locus 25.6 () Automated name-based View Maps
Rye - Rye, Ds2 x RxL10 - Secale-Devos-1R Glu-1 locus 3.1 () Automated name-based View Maps
Xubp19-1D.2 locus -45.4 No other positions
Xpsr1327-1D locus -38.9 No other positions
Tri-1 locus -37.4 Wheat ABD - Wheat, Gale - Ta-Gale-1A Tri-1 locus -37.4 () Automated name-based View Maps
Wheat ABD - Wheat, Gale - Ta-Gale-1B Tri-1 locus -37.4 () Automated name-based View Maps
Xpsr688-1D.2 locus -31.9 No other positions
Si-2 locus -28.9 Wheat ABD - Wheat, Gale - Ta-Gale-1B Si-2 locus -28.9 () Automated name-based View Maps
Wheat ABD - Wheat, Gale - Ta-Gale-1A Si-2 locus -28.9 () Automated name-based View Maps
Xbcd98-1D locus -22.4 No other positions
Xcdo99-1D locus -22.4 No other positions
Xubp19-1D.1 locus -19.4 No other positions
Xpsr688-1D.1 locus -2.9 No other positions
Xcdo1118-1D locus -1.6 No other positions
Xcdo658-1D locus -1 No other positions
Xbcd12-1D locus 0.3 No other positions
Xbcd200-1D locus 0.3 No other positions
Xpsr1201-1D locus 0.4 No other positions
Xpsr544-1D locus 2.6 No other positions
Xpsr95(Em)-1D locus 3.8 No other positions
Xpsr465(Ppdk)-1D locus 4.4 No other positions
Xpsr488(Lec)-1D locus 26.8 No other positions
Xbcd442-1D locus 39.4 No other positions
XksuE8-1D locus 40.3 No other positions
Xwg180-1D locus 41.9 No other positions
Xubp24-1D locus 46.9 No other positions
Xtav1931(beta-ATP)-1D locus 48.6 No other positions

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.