*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat ABD-Wheat, Synthetic x Opata, GPW
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Ta-Synthetic/Opata-GPW-1D
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Wheat ABD - Wheat, Synthetic x Opata, GPW [ View Map Set Info ]
Map Name: Ta-Synthetic/Opata-GPW-1D
Map Start: 0
Map Stop: 250.3
Features by Type:
101 locus
101 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 26 to 50 of 101.       Previous | of 5 | Next
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-1D
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
Xgwm106-1D locus 38.4 Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-1D Xgwm106-1D locus 35.5 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-1D Xgwm106-1D locus 27.8 () Automated name-based View Maps
Wheat ABD - Wheat, Courtot x Chinese Spring, GPW - Ta-Courtot/CS-GPW-1D Xgwm106-1D locus 19.7 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_1D Xgwm106-1D locus -0.24 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-1D Xgwm106-1D locus 25.65 () Automated name-based View Maps
Xfba250-1D locus 58 Wheat ABD - Wheat, Courtot x Chinese Spring, GPW - Ta-Courtot/CS-GPW-1D Xfba250-1D locus 37.9 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR 2 - Ta-Synthetic/Opata-SSR2-1D Xfba250-1D locus 64.9 () Automated name-based View Maps
Xcfd19-1D locus 74.7 Wheat ABD - Wheat, Courtot x Chinese Spring, GPW - Ta-Courtot/CS-GPW-1D Xcfd19-1D locus 66.9 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-1D Xcfd19-1D locus 59.5 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_1D Xcfd19-1D locus 0.7 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-1D Xcfd19-1D locus 69.2 () Automated name-based View Maps
Xfba259-1D locus 0 Wheat ABD - Wheat, Synthetic x Opata, SSR 2 - Ta-Synthetic/Opata-SSR2-1D Xfba259-1D locus 0 () Automated name-based View Maps
Xhor-1D locus 12 No other positions
XksuD14-1D.1 locus 15.9 Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-1D XksuD14-1D.1 locus 6.8 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-1D XksuD14-1D.1 locus 11.1 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-1D XksuD14-1D.1 locus 0 () Automated name-based View Maps
Xmta14-1D (Gli D1) locus 17 No other positions
Xmta16-1D.1 (Glu D2) locus 17 No other positions
XGliD1-1D (Gli D1) locus 17.1 No other positions
XksuD14-1D.2 locus 17.1 Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-1D XksuD14-1D.2 locus 8.3 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-1D XksuD14-1D.2 locus 13.4 () Automated name-based View Maps
Xwmc147-1D locus 17.5 Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-1D Xwmc147-1D locus 16.4 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR 2 - Ta-Synthetic/Opata-SSR2-1D Xwmc147-1D locus 18.5 () Automated name-based View Maps
XksuD14-1D.3 locus 17.7 No other positions
Xmta16-1D.2 (Glu D2) locus 20 No other positions
XCB-1DL locus 20.8 No other positions
Xmta16-1D.3 (Glu D2) locus 20.9 No other positions
Xmwg60-1D locus 21.8 Wheat D - 1DS, Ae. tauschii - 1DS, Ae. tauschii Xmwg60-1D locus 24.9 () Automated name-based View Maps
Xgpw7082-1D locus 23 Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_1D Xgpw7082-1D locus -0.64 () Automated name-based View Maps
Xwhs179-1D locus 24.6 Wheat ABD - Wheat, Synthetic x Opata, SSR 2 - Ta-Synthetic/Opata-SSR2-1D Xwhs179-1D locus 29.9 () Automated name-based View Maps
Xgwm33-1D locus 27.7 Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_1D Xgwm33-1D locus -0.24 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-1D Xgwm33-1D locus 17.9 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-1D Xgwm33-1D locus 12.2 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-1D Xgwm33-1D locus 22 () Automated name-based View Maps
Xcfd15-1D locus 28.1 Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_1D Xcfd15-1D locus -0.24 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-1D Xcfd15-1D locus 23.2 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-1D Xcfd15-1D locus 19.5 () Automated name-based View Maps
Xfbb160-1D locus 33.4 No other positions
Xfba285-1D locus 38.5 No other positions
Xwmc329-1D locus 39.4 Wheat ABD - Wheat, Synthetic x Opata, SSR 2 - Ta-Synthetic/Opata-SSR2-1D Xwmc329-1D locus 44.9 () Automated name-based View Maps
Xgpw7109-1D locus 40.7 No other positions
Xcfd92-1D locus 45.5 Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-1D Xcfd92-1D locus 33.1 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-1D Xcfd92-1D locus 42 () Automated name-based View Maps

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.