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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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Map Set Wheat ABD-Wheat, Synthetic x Opata, SSR-D
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Wheat ABD - Wheat, Synthetic x Opata, SSR-D [ View Map Set Info ]
Map Name: Ta-Synthetic/Opata-SSR_D-4D
Map Start: 0
Map Stop: 123.5
Features by Type:
15 locus
15 Total

Map Features

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Items 1 to 15 of 15.
Wheat ABD - Wheat, Synthetic x Opata, SSR-D - Ta-Synthetic/Opata-SSR_D-4D
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Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
Xgdm125-4D locus 55.5 Wheat ABD - Wheat, Conan x Reeder - Conan/Reeder-4D Xgdm125-4D locus 222.24 () Automated name-based View Maps
Wheat ABD - Wheat, Grandin x BR34 - Ta-Grandin/BR34-4D Xgdm125-4D locus 40 () Automated name-based View Maps
Xmwg634-4D locus 0 Wheat ABD - Wheat, Synthetic x Opata, DR Genes - Ta-Synthetic/Opata-DR-4D Xmwg634-4D locus -52.2 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-4D Xmwg634-4D locus 0 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-4D Xmwg634-4D locus 0 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-4D Xmwg634-4D locus 0 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, gbx RFLP - Ta-Synthetic/Opata-gbx-4D Xmwg634-4D locus 0 () Automated name-based View Maps
Xbcd265-4D locus 33.2 Wheat ABD - Wheat, Synthetic x Opata, SSR 2 - Ta-Synthetic/Opata-SSR2-4D Xbcd265-4D locus 0 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-4D Xbcd265-4D locus 0 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-4D Xbcd265-4D locus 32 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, gbx RFLP - Ta-Synthetic/Opata-gbx-4D Xbcd265-4D locus 42.2 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-4D Xbcd265-4D locus 42.2 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-4D Xbcd265-4D locus 30.9 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, DR Genes - Ta-Synthetic/Opata-DR-4D Xbcd265-4D locus -10 () Automated name-based View Maps
Xbcd327-4D locus 42.6 Wheat ABD - Wheat, Synthetic x Opata, DR Genes - Ta-Synthetic/Opata-DR-4D Xbcd327-4D locus -1.3 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-4D Xbcd327-4D locus 10.3 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-4D Xbcd327-4D locus 40.6 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, gbx RFLP - Ta-Synthetic/Opata-gbx-4D Xbcd327-4D locus 51.6 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-4D Xbcd327-4D locus 50.9 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-4D Xbcd327-4D locus 39.9 () Automated name-based View Maps
Centromere-4D locus 45 Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-4D Centromere-4D locus 40.6 - 44.4 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-4D Centromere-4D locus 0 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR 2 - Ta-Synthetic/Opata-SSR2-4D Centromere-4D locus 13.5 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, DR Genes - Ta-Synthetic/Opata-DR-4D Centromere-4D locus 0 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, gbx RFLP - Ta-Synthetic/Opata-gbx-4D Centromere-4D locus 53 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, R Genes - Ta-Physical-RGenes-4D Centromere-4D locus 0 () Automated name-based View Maps
Wheat ABD - Wheat, Grandin x BR34 - Ta-Grandin/BR34-4D Centromere-4D locus 29.5 () Automated name-based View Maps
XksuF8-4D locus 48 Wheat ABD - Wheat, Synthetic x Opata, SSR 2 - Ta-Synthetic/Opata-SSR2-4D XksuF8-4D locus 15.7 () Automated name-based View Maps
Wheat ABD - Wheat, Gale - Ta-Gale-4D XksuF8-4D locus 5.7 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-4D XksuF8-4D locus 44.4 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-4D XksuF8-4D locus 54.7 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-4D XksuF8-4D locus 43.8 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, DR Genes - Ta-Synthetic/Opata-DR-4D XksuF8-4D locus 2.5 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-4D XksuF8-4D locus 14 () Automated name-based View Maps
Xbcd15-4D locus 58.6 Wheat ABD - Wheat, Synthetic x Opata, gbx RFLP - Ta-Synthetic/Opata-gbx-4D Xbcd15-4D locus 71.5 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-4D Xbcd15-4D locus 25.9 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, DR Genes - Ta-Synthetic/Opata-DR-4D Xbcd15-4D locus 12.7 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-4D Xbcd15-4D locus 55.4 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-4D Xbcd15-4D locus 70.5 () Automated name-based View Maps
Xfbb178-4D locus 63.9 Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-4D Xfbb178-4D locus 76.1 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-4D Xfbb178-4D locus 58.9 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-4D Xfbb178-4D locus 31.4 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, DR Genes - Ta-Synthetic/Opata-DR-4D Xfbb178-4D locus 18 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-4D Xfbb178-4D locus 62.6 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR 2 - Ta-Synthetic/Opata-SSR2-4D Xfbb178-4D locus 30.9 () Automated name-based View Maps
Xcdo1312-4D locus 72.1 Wheat ABD - Wheat, Synthetic x Opata, DR Genes - Ta-Synthetic/Opata-DR-4D Xcdo1312-4D locus 26.1 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-4D Xcdo1312-4D locus 41.4 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-4D Xcdo1312-4D locus 84.1 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-4D Xcdo1312-4D locus 73 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, gbx RFLP - Ta-Synthetic/Opata-gbx-4D Xcdo1312-4D locus 80.6 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR 2 - Ta-Synthetic/Opata-SSR2-4D Xcdo1312-4D locus 40.6 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-4D Xcdo1312-4D locus 64.4 () Automated name-based View Maps
Xfba177-4D locus 112 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-4D Xfba177-4D locus 78.7 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, DR Genes - Ta-Synthetic/Opata-DR-4D Xfba177-4D locus 63.8 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-4D Xfba177-4D locus 121.8 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, gbx RFLP - Ta-Synthetic/Opata-gbx-4D Xfba177-4D locus 115.7 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-4D Xfba177-4D locus 112.8 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR 2 - Ta-Synthetic/Opata-SSR2-4D Xfba177-4D locus 77.8 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-4D Xfba177-4D locus 98.1 () Automated name-based View Maps
Xgdm129-4D locus 41.6 Wheat ABD - Wheat, Louise x Penawawa - Louise/Penawawa-4D Xgdm129-4D locus 0 () Automated name-based View Maps
Xgdm61-4D locus 45.3 No other positions
Xbcd1431-4D.1 locus 83.1 Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-4D Xbcd1431-4D.1 locus 95.2 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-4D Xbcd1431-4D.1 locus 84 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, gbx RFLP - Ta-Synthetic/Opata-gbx-4D Xbcd1431-4D.1 locus 91.2 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-4D Xbcd1431-4D.1 locus 73.8 () Automated name-based View Maps
Xfbb266-4D locus 99.2 No other positions
Xcdo949-4D locus 123.5 Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-4D Xcdo949-4D locus 124.3 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-4D Xcdo949-4D locus 125.8 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-4D Xcdo949-4D locus 105.4 () Automated name-based View Maps

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