*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat ABD-Wheat, Synthetic x Opata, SSR 2
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Ta-Synthetic/Opata-SSR2-2A
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
(Hide Advanced Menu)

Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Wheat ABD - Wheat, Synthetic x Opata, SSR 2 [ View Map Set Info ]
Map Name: Ta-Synthetic/Opata-SSR2-2A
Map Start: 0
Map Stop: 142.7
Features by Type:
14 locus
14 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 14 of 14.
Wheat ABD - Wheat, Synthetic x Opata, SSR 2 - Ta-Synthetic/Opata-SSR2-2A
(Click headers to resort)		 Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
Xwmc177-2A locus 42.7 Wheat ABD - Wheat, Chinese Spring x SQ1 - CS/SQ1-2A Xwmc177-2A locus 48.4 () Automated name-based View Maps
Wheat A - T. boeoticum x monococcum - T.b.xT.m.-2A Xwmc177-2A locus 57.8 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-2A Xwmc177-2A locus 28.3 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-2A Xwmc177-2A locus 73.8 () Automated name-based View Maps
Wheat ABD - Wheat, Courtot x Chinese Spring, GPW - Ta-Courtot/CS-GPW-2A Xwmc177-2A locus 6.7 () Automated name-based View Maps
Xwmc181-2A locus 115.3 Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-2A Xwmc181-2A locus 103.1 () Automated name-based View Maps
Wheat ABD - Wheat, Chinese Spring x SQ1 - CS/SQ1-2A Xwmc181-2A locus 171.1 () Automated name-based View Maps
Wheat ABD - Wheat, Louise x Penawawa - Louise/Penawawa-2A Xwmc181-2A locus 87.6 () Automated name-based View Maps
XksuD18-2A locus 30.1 Wheat A - T. boeoticum x monococcum - T.b.xT.m.-2A XksuD18-2A locus 18.5 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-2A XksuD18-2A locus 54.1 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-2A XksuD18-2A locus 49.6 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, DR Genes - Ta-Synthetic/Opata-DR-2A XksuD18-2A locus -89.1 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-2A XksuD18-2A locus 17.7 () Automated name-based View Maps
Xfba178-2A locus 44.4 Wheat A - T. boeoticum x monococcum - T.b.xT.m.-2A Xfba178-2A locus 58.7 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-2A Xfba178-2A locus 69.5 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-2A Xfba178-2A locus 75.4 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, DR Genes - Ta-Synthetic/Opata-DR-2A Xfba178-2A locus -67.3 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-2A Xfba178-2A locus 57.8 () Automated name-based View Maps
Wheat ABD - Wheat, Courtot x Chinese Spring, GPW - Ta-Courtot/CS-GPW-2A Xfba178-2A locus 9.7 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-2A Xfba178-2A locus 42.3 () Automated name-based View Maps
Xbcd152-2A locus 74.2 Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-2A Xbcd152-2A locus 88.1 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, DR Genes - Ta-Synthetic/Opata-DR-2A Xbcd152-2A locus -13.9 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-2A Xbcd152-2A locus 102.1 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-2A Xbcd152-2A locus 112.8 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-2A Xbcd152-2A locus 71.6 () Automated name-based View Maps
Centromere-2A locus 82.2 Wheat AB - T. turgidum, JK x Cham1 - Tturgidum-JKxC-2A Centromere-2A locus 0 () Automated name-based View Maps
Wheat AB - Durum Wheat, Anthocyanin, 2010 - Tdurum_TRI15744xTRI2719-2A Centromere-2A locus 20.6 (cM) Automated name-based View Maps
Wheat ABD - Wheat, Forno x Oberkulmer - Triticum-FxO-2A Centromere-2A locus 85 () Automated name-based View Maps
Wheat AB - T. turgidum, Omrabi5 x dicoccoides, QTL - Tt-Oxd-QTL-2A Centromere-2A locus 242.4 () Automated name-based View Maps
Wheat ABD - Wheat, 2006, purple grain - Wheat_Novo67xPurple_2006-2A Centromere-2A locus 10 (cM) Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, DR Genes - Ta-Synthetic/Opata-DR-2A Centromere-2A locus 0 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-2A Centromere-2A locus 105 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides - Tturgidum-MxM-2A Centromere-2A locus 0 () Automated name-based View Maps
Wheat ABD - Wheat, 2006, purple grain - Wheat_Novo67xPurpleFeed_2006-2A Centromere-2A locus 27.9 (cM) Automated name-based View Maps
Wheat ABD - Wheat, Physical, R Genes - Ta-Physical-RGenes-2A Centromere-2A locus 0 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-2A Centromere-2A locus 97 - 100.8 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, AFLP - Tturgidum-MxM-AFLP-2A Centromere-2A locus 83.3 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, SSR - Tturgidum-SSR-2A Centromere-2A locus 0 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, gbx RFLP - Ta-Synthetic/Opata-gbx-2A Centromere-2A locus 96 () Automated name-based View Maps
Xbcd543-2A locus 93.9 Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-2A Xbcd543-2A locus 85.5 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, gbx RFLP - Ta-Synthetic/Opata-gbx-2A Xbcd543-2A locus 110.4 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, DR Genes - Ta-Synthetic/Opata-DR-2A Xbcd543-2A locus 4.7 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-2A Xbcd543-2A locus 119.4 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-2A Xbcd543-2A locus 104 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-2A Xbcd543-2A locus 131.7 () Automated name-based View Maps
Xbcd1095-2A locus 109.5 Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-2A Xbcd1095-2A locus 94.3 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-2A Xbcd1095-2A locus 146.4 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, DR Genes - Ta-Synthetic/Opata-DR-2A Xbcd1095-2A locus 22.2 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-2A Xbcd1095-2A locus 133.8 () Automated name-based View Maps
Xbcd292-2A locus 129.1 Wheat ABD - Wheat, Synthetic x Opata, DR Genes - Ta-Synthetic/Opata-DR-2A Xbcd292-2A locus 42.2 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-2A Xbcd292-2A locus 168.5 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-2A Xbcd292-2A locus 108.8 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-2A Xbcd292-2A locus 150.4 () Automated name-based View Maps
Wheat ABD - Wheat, SxS, FHB QTL - Triticum-SxS-FHB-QTL-2A Xbcd292-2A locus 21 () Automated name-based View Maps
Xfba272-2A locus 53.5 Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-2A Xfba272-2A locus 78.7 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-2A Xfba272-2A locus 64.1 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-2A Xfba272-2A locus 83.4 () Automated name-based View Maps
Wheat A - T. boeoticum x monococcum - T.b.xT.m.-2A Xfba272-2A locus 68.5 () Automated name-based View Maps
Xwmc261-2A locus 91.5 Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-2A Xwmc261-2A locus 62.3 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-2A Xwmc261-2A locus 117.2 () Automated name-based View Maps
Xfba314-2A locus 142.7 Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-2A Xfba314-2A locus 120.1 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, gbx RFLP - Ta-Synthetic/Opata-gbx-2A Xfba314-2A locus 159.9 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-2A Xfba314-2A locus 163.9 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-2A Xfba314-2A locus 186.3 () Automated name-based View Maps
Xcdo456.1-2A locus 0 No other positions
Xcdo456.2-2A locus 19.4 No other positions

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.