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GrainGenes Marker Report: Nar7 (Hordeum)

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Gene
Nar7 (Hordeum)
Gene Class
NAD(P)H bispecific nitrate reductase
Locus
Nar7
X60173
Candidate Locus
Nar7
Reference
ReferenceKleinhofs A and Kilian A (1994) DNA based markers in plants. 1.
Chromosome
6H
Clone
pMJ4.1
Info Source
Referencevon Wettstein-Knowles P (1993) Barley (Hordeum vulgare) 2N = 14. Genetic maps : locus maps of complex genomes..



Locus Associated with Gene
Nar7
Type
Gene
RFLP
Synonym
SynonymNar7 (Hordeum)
Chromosome
6H
Chromosome Arm
6HL
Map
[ Hide all but 1 of 18 ]
Barley-Consensus-6H18.1
Barley-Consensus2-6H83.5
Hordeum-Bins-6H92.7
Hordeum-Consensus2005-SNP-6H94.758
Hordeum-Consensus2006-DArT-6H94.7
Hordeum-Consensus2007-SSR-6H84.66
Hordeum-NABGMP1-6H76
Hordeum-OPA-2009-6H140.62
Hordeum-PilotOPA1-6H92.8
Hordeum-QTLConsensus-Abiotic-6H94.76
Hordeum-QTLConsensus-Agronomic-6H94.76
Hordeum-StMo-SNP-6H86.03
Hordeum-SxM-base-6H93.5
Hordeum-SxM-FeedQTL-6H76
Hordeum-SxM-SSAP-6H92.1
Hordeum-SxM-SSR-6H101.1
Hv-Consensus2006-Marcel-6H84.66
Hv-Integrated2009-6H85.1
[ Show Nearby Loci ]
In QTL
QHt.StMo-6H
Map Data
[ Hide all but 1 of 18 ]
Barley consensus
Barley consensus 2
Barley, Abiotic QTL Consensus
Barley, Agronomic QTL Consensus
Barley, BinMap 2005
Barley, Consensus 2005, SNP
Barley, Consensus 2006, DArT
Barley, Consensus 2006, Marcel
Barley, Consensus 2007, SSR
Barley, Integrated, Marcel 2009
Barley, OPA 2009, Consensus
Barley, Pilot OPA1, Consensus
Barley, Steptoe x Morex, SNP
Barley, Steptoe x Morex, SSAP
Barley, Steptoe x Morex, SSR
Barley, SxM
Barley, SxM basemap
Barley, SxM, Feed QTLs
Species
Hordeum vulgare
Probe
NAR7
pMJ4.1
Associated Gene
Nar7 (Hordeum)
Candidate Gene
Nar7 (Hordeum)
Gene Class
NAD(P)H bispecific nitrate reductase
Reference
ReferenceClose TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582.
[ Show all 6 ]
Data Source
Blake, Tom05.04.19
Close, Timothy J.
Remark
Number of populations contributing to the placement of Nar7 in the Barley, Consensus 2006 DArT maps = 1
Bin on the 'Barley, Integrated, Marcel 2009' Map Set : 'chromosome_kleinhofs & graner BIN nb.subBIN nb'
Mapping population(s) used for locus placement on the 'Barley, Integrated, Marcel 2009' Map Set = Steptoe x Morex
Loci in 'Barley, Consensus 2006, Marcel' mapped in population(s) : Steptoe x Morex
Locus in 'Barley, Consensus 2007, SSR' was a BIN marker in 'Barley, Consensus 2006, Marcel'



Locus Associated with Gene
X60173
Map
Hordeum-Bins-6H93.7
[ Show Nearby Loci ]
Map Data
Barley, BinMap 2005
Associated Gene
Nar7 (Hordeum)
Gene Class
NAD(P)H bispecific nitrate reductase
Reference
ReferenceWarner R et al. (1995) Association of the NAD(P)H-bispecific nitrate reductase structural gene with the Nar7 locus in barley Genome 38:743-746.
Remark
The X60173 RFLP/STS is a gene marker for the Nar7 (Hordeum) gene



Locus Candidate for Gene
Nar7
Type
Gene
RFLP
Synonym
SynonymNar7 (Hordeum)
Chromosome
6H
Chromosome Arm
6HL
Map
[ Hide all but 1 of 18 ]
Barley-Consensus-6H18.1
Barley-Consensus2-6H83.5
Hordeum-Bins-6H92.7
Hordeum-Consensus2005-SNP-6H94.758
Hordeum-Consensus2006-DArT-6H94.7
Hordeum-Consensus2007-SSR-6H84.66
Hordeum-NABGMP1-6H76
Hordeum-OPA-2009-6H140.62
Hordeum-PilotOPA1-6H92.8
Hordeum-QTLConsensus-Abiotic-6H94.76
Hordeum-QTLConsensus-Agronomic-6H94.76
Hordeum-StMo-SNP-6H86.03
Hordeum-SxM-base-6H93.5
Hordeum-SxM-FeedQTL-6H76
Hordeum-SxM-SSAP-6H92.1
Hordeum-SxM-SSR-6H101.1
Hv-Consensus2006-Marcel-6H84.66
Hv-Integrated2009-6H85.1
[ Show Nearby Loci ]
In QTL
QHt.StMo-6H
Map Data
[ Hide all but 1 of 18 ]
Barley consensus
Barley consensus 2
Barley, Abiotic QTL Consensus
Barley, Agronomic QTL Consensus
Barley, BinMap 2005
Barley, Consensus 2005, SNP
Barley, Consensus 2006, DArT
Barley, Consensus 2006, Marcel
Barley, Consensus 2007, SSR
Barley, Integrated, Marcel 2009
Barley, OPA 2009, Consensus
Barley, Pilot OPA1, Consensus
Barley, Steptoe x Morex, SNP
Barley, Steptoe x Morex, SSAP
Barley, Steptoe x Morex, SSR
Barley, SxM
Barley, SxM basemap
Barley, SxM, Feed QTLs
Species
Hordeum vulgare
Probe
NAR7
pMJ4.1
Associated Gene
Nar7 (Hordeum)
Candidate Gene
Nar7 (Hordeum)
Gene Class
NAD(P)H bispecific nitrate reductase
Reference
ReferenceClose TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582.
[ Show all 6 ]
Data Source
Blake, Tom05.04.19
Close, Timothy J.
Remark
Number of populations contributing to the placement of Nar7 in the Barley, Consensus 2006 DArT maps = 1
Bin on the 'Barley, Integrated, Marcel 2009' Map Set : 'chromosome_kleinhofs & graner BIN nb.subBIN nb'
Mapping population(s) used for locus placement on the 'Barley, Integrated, Marcel 2009' Map Set = Steptoe x Morex
Loci in 'Barley, Consensus 2006, Marcel' mapped in population(s) : Steptoe x Morex
Locus in 'Barley, Consensus 2007, SSR' was a BIN marker in 'Barley, Consensus 2006, Marcel'



Locus
Nar7 (Hordeum)
Synonym
SynonymNar7