*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat ABD-Wheat-2018-NAM4-Berkut-x-PI366716
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Wheat-2018-NAM4-BxPI366716_4D
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Wheat ABD - Wheat-2018-NAM4-Berkut-x-PI366716 [ View Map Set Info ]
Map Name: Wheat-2018-NAM4-BxPI366716_4D
Map Start: 0
Map Stop: 31.6
Features by Type:
139 locus
139 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 139.       of 6 | Next
Wheat ABD - Wheat-2018-NAM4-Berkut-x-PI366716 - Wheat-2018-NAM4-BxPI366716_4D
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
SpringWheatNAM_tag_57473-4D locus 0 Wheat ABD - Wheat-2018-NAM13-Berkut-x-PI262611 - Wheat-2018-NAM13-BxPI262611_4D SpringWheatNAM_tag_57473-4D locus 0.7 () Automated name-based View Maps
SpringWheatNAM_tag_143329-4D locus 0 Wheat ABD - Wheat-2018-NAM13-Berkut-x-PI262611 - Wheat-2018-NAM13-BxPI262611_4D SpringWheatNAM_tag_143329-4D locus 0.7 () Automated name-based View Maps
SpringWheatNAM_tag_339154-4D locus 0 No other positions
SpringWheatNAM_tag_63145-4D locus 0 Wheat ABD - Wheat-2018-NAM13-Berkut-x-PI262611 - Wheat-2018-NAM13-BxPI262611_4D SpringWheatNAM_tag_63145-4D locus 0 () Automated name-based View Maps
SpringWheatNAM_tag_205999-4D locus 0 No other positions
SpringWheatNAM_tag_62650-4D locus 0 Wheat ABD - Wheat-2018-NAM13-Berkut-x-PI262611 - Wheat-2018-NAM13-BxPI262611_4D SpringWheatNAM_tag_62650-4D locus 0 () Automated name-based View Maps
SpringWheatNAM_tag_205908-4D locus 0 No other positions
SpringWheatNAM_tag_206126-4D locus 0 No other positions
SpringWheatNAM_tag_205911-4D locus 0 No other positions
SpringWheatNAM_tag_206055-4D locus 0 No other positions
SpringWheatNAM_tag_57813-4D locus 0 Wheat ABD - Wheat-2018-NAM13-Berkut-x-PI262611 - Wheat-2018-NAM13-BxPI262611_4D SpringWheatNAM_tag_57813-4D locus 0.7 () Automated name-based View Maps
SpringWheatNAM_tag_206304-4D locus 0 No other positions
SpringWheatNAM_tag_64055-4D locus 0 Wheat ABD - Wheat-2018-NAM13-Berkut-x-PI262611 - Wheat-2018-NAM13-BxPI262611_4D SpringWheatNAM_tag_64055-4D locus 0 () Automated name-based View Maps
SpringWheatNAM_tag_62333-4D locus 0 Wheat ABD - Wheat-2018-NAM13-Berkut-x-PI262611 - Wheat-2018-NAM13-BxPI262611_4D SpringWheatNAM_tag_62333-4D locus 0 () Automated name-based View Maps
SpringWheatNAM_tag_205898-4D locus 0 No other positions
SpringWheatNAM_tag_206127-4D locus 0 No other positions
SpringWheatNAM_tag_206422-4D locus 0 No other positions
SpringWheatNAM_tag_199866-4D locus 0 No other positions
Excalibur_c29846_617 locus 0 Wheat ABD - Wheat-2018-NAM13-Berkut-x-PI262611 - Wheat-2018-NAM13-BxPI262611_4D Excalibur_c29846_617 locus 0.7 () Automated name-based View Maps
Wheat ABD - Wheat_2014_90KSNP - Wheat_2014_90KSNP_4D IWB24899 locus 21.31 () Automated name-based View Maps
SpringWheatNAM_tag_56635-4D locus 31.6 Wheat ABD - Wheat-2018-NAM14-Berkut-x-PI70613 - Wheat-2018-NAM14-BxPI70613_4D SpringWheatNAM_tag_56635-4D locus 0 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM24-Berkut-x-PI192147 - Wheat-2018-NAM24-BxPI192147_4D SpringWheatNAM_tag_56635-4D locus 3.8 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM29-Berkut-x-PI220431 - Wheat-2018-NAM29-BxPI220431_4D SpringWheatNAM_tag_56635-4D locus 57.2 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM17-Berkut-x-PI82469 - Wheat-2018-NAM17-BxPI82469_4D SpringWheatNAM_tag_56635-4D locus 105.6 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM13-Berkut-x-PI262611 - Wheat-2018-NAM13-BxPI262611_4D SpringWheatNAM_tag_56635-4D locus 53.1 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM23-Berkut-x-PI192001 - Wheat-2018-NAM23-BxPI192001_4D SpringWheatNAM_tag_56635-4D locus 115.1 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM16-Berkut-x-PI8813 - Wheat-2018-NAM16-BxPI8813_4D SpringWheatNAM_tag_56635-4D locus 72.1 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM3-Berkut-x-PI283147 - Wheat-2018-NAM3-BxPI283147_4D SpringWheatNAM_tag_56635-4D locus 0.7 () Automated name-based View Maps
BobWhite_c4264_238 locus 31.6 Wheat ABD - Wheat-2018-NAM10-Berkut-x-PI9791 - Wheat-2018-NAM10-BxPI9791_4D BobWhite_c4264_238 locus 2.3 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM9-Berkut-x-Vida - Wheat-2018-NAM9-BxVida_4D BobWhite_c4264_238 locus 13.9 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM3-Berkut-x-PI283147 - Wheat-2018-NAM3-BxPI283147_4D BobWhite_c4264_238 locus 0.7 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM18-Berkut-x-CItr15144 - Wheat-2018-NAM18-BxCItr15144_4D BobWhite_c4264_238 locus 84.9 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM20-Berkut-x-PI94567 - Wheat-2018-NAM20-BxPI94567_4D BobWhite_c4264_238 locus 23.4 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM12-Berkut-x-CItr11223 - Wheat-2018-NAM12-BxCItr11223_4D BobWhite_c4264_238 locus 8.7 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM1-Berkut-x-DharwarDry - Wheat-2018-NAM1-BxDharwarDry_4D BobWhite_c4264_238 locus 184.1 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM30-Berkut-x-PI278297 - Wheat-2018-NAM30-BxPI278297_4D BobWhite_c4264_238 locus 19.1 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM17-Berkut-x-PI82469 - Wheat-2018-NAM17-BxPI82469_4D BobWhite_c4264_238 locus 107.1 () Automated name-based View Maps
Wheat ABD - Wheat_2014_90KSNP - Wheat_2014_90KSNP_4D IWB3254 locus 80.68 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM15-Berkut-x-CItr7635 - Wheat-2018-NAM15-BxCItr7635_4D BobWhite_c4264_238 locus 43.8 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM7-Berkut-x-PI565213 - Wheat-2018-NAM7-BxPI565213_4D BobWhite_c4264_238 locus 0.7 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM28-Berkut-x-PI210945 - Wheat-2018-NAM28-BxPI210945_4D BobWhite_c4264_238 locus 14.9 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM23-Berkut-x-PI192001 - Wheat-2018-NAM23-BxPI192001_4D BobWhite_c4264_238 locus 108.8 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM13-Berkut-x-PI262611 - Wheat-2018-NAM13-BxPI262611_4D BobWhite_c4264_238 locus 48.7 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM11-Berkut-x-CItr4175 - Wheat-2018-NAM11-BxCItr4175_4D BobWhite_c4264_238 locus 48.6 () Automated name-based View Maps
SpringWheatNAM_tag_120917-4D locus 31.6 Wheat ABD - Wheat-2018-NAM28-Berkut-x-PI210945 - Wheat-2018-NAM28-BxPI210945_4D SpringWheatNAM_tag_120917-4D locus 18.7 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM20-Berkut-x-PI94567 - Wheat-2018-NAM20-BxPI94567_4D SpringWheatNAM_tag_120917-4D locus 23.4 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM16-Berkut-x-PI8813 - Wheat-2018-NAM16-BxPI8813_4D SpringWheatNAM_tag_120917-4D locus 70.6 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM13-Berkut-x-PI262611 - Wheat-2018-NAM13-BxPI262611_4D SpringWheatNAM_tag_120917-4D locus 48.7 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM19-Berkut-x-PI43355 - Wheat-2018-NAM19-BxPI43355_4D SpringWheatNAM_tag_120917-4D locus 35.4 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM2-Berkut-x-PI572692 - Wheat-2018-NAM2-BxPI572692_4D SpringWheatNAM_tag_120917-4D locus 23 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM26-Berkut-x-PI185715 - Wheat-2018-NAM26-BxPI185715_4D SpringWheatNAM_tag_120917-4D locus 0 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM24-Berkut-x-PI192147 - Wheat-2018-NAM24-BxPI192147_4D SpringWheatNAM_tag_120917-4D locus 0.7 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM30-Berkut-x-PI278297 - Wheat-2018-NAM30-BxPI278297_4D SpringWheatNAM_tag_120917-4D locus 17.7 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM17-Berkut-x-PI82469 - Wheat-2018-NAM17-BxPI82469_4D SpringWheatNAM_tag_120917-4D locus 108.5 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM3-Berkut-x-PI283147 - Wheat-2018-NAM3-BxPI283147_4D SpringWheatNAM_tag_120917-4D locus 1.4 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM5-Berkut-x-PI382150 - Wheat-2018-NAM5-BxPI382150_4D SpringWheatNAM_tag_120917-4D locus 10.9 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM23-Berkut-x-PI192001 - Wheat-2018-NAM23-BxPI192001_4D SpringWheatNAM_tag_120917-4D locus 110.2 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM9-Berkut-x-Vida - Wheat-2018-NAM9-BxVida_4D SpringWheatNAM_tag_120917-4D locus 13.9 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM29-Berkut-x-PI220431 - Wheat-2018-NAM29-BxPI220431_4D SpringWheatNAM_tag_120917-4D locus 59.4 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM10-Berkut-x-PI9791 - Wheat-2018-NAM10-BxPI9791_4D SpringWheatNAM_tag_120917-4D locus 2.3 () Automated name-based View Maps
SpringWheatNAM_tag_28649-4D locus 31.6 Wheat ABD - Wheat-2018-NAM10-Berkut-x-PI9791 - Wheat-2018-NAM10-BxPI9791_4D SpringWheatNAM_tag_28649-4D locus 2.3 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM26-Berkut-x-PI185715 - Wheat-2018-NAM26-BxPI185715_4D SpringWheatNAM_tag_28649-4D locus 0 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM30-Berkut-x-PI278297 - Wheat-2018-NAM30-BxPI278297_4D SpringWheatNAM_tag_28649-4D locus 17.7 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM15-Berkut-x-CItr7635 - Wheat-2018-NAM15-BxCItr7635_4D SpringWheatNAM_tag_28649-4D locus 44.4 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM12-Berkut-x-CItr11223 - Wheat-2018-NAM12-BxCItr11223_4D SpringWheatNAM_tag_28649-4D locus 8.7 () Automated name-based View Maps
SpringWheatNAM_tag_202516-4D locus 31.6 No other positions
SpringWheatNAM_tag_204881-4D locus 31.6 No other positions

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.