*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat ABD-Wheat, Avalon x Cadenza
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Wheat, Avalon x Cadenza 5D
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Wheat ABD - Wheat, Avalon x Cadenza [ View Map Set Info ]
Map Name: Wheat, Avalon x Cadenza 5D
Map Start: 0
Map Stop: 193.1
Features by Type:
20 locus
20 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 20 of 20.
Wheat ABD - Wheat, Avalon x Cadenza - Wheat, Avalon x Cadenza 5D
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
BS00003563 locus 193.1 No other positions
wPt-0596 locus 175.3 No other positions
BS00011769 locus 174.1 Wheat ABD - Wheat_2017_LRC - Wheat_2017_LRC-5D BS00011769 locus 33.1 () Automated name-based View Maps
BS00004065 locus 172.5 Wheat ABD - Wheat_2017_LRC - Wheat_2017_LRC-5D BS00004065 locus 33.1 () Automated name-based View Maps
BS00003783 locus 170.9 Wheat ABD - Wheat_2017_LRC - Wheat_2017_LRC-5D BS00003783 locus 33.1 () Automated name-based View Maps
BS00009294 locus 169.8 No other positions
BS00003826 locus 169.3 Wheat ABD - Wheat_2017_LRC - Wheat_2017_LRC-5D BS00003826 locus 35.1 () Automated name-based View Maps
BS00000622 locus 162.3 Wheat ABD - Wheat_2017_LRC - Wheat_2017_LRC-5D BS00000622 locus 39.7 () Automated name-based View Maps
BS00003711 locus 162.3 Wheat ABD - Wheat-2018-NAM3-Berkut-x-PI283147 - Wheat-2018-NAM3-BxPI283147_5D BS00003711_51 locus 32 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM11-Berkut-x-CItr4175 - Wheat-2018-NAM11-BxCItr4175_5D BS00003711_51 locus 106.8 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM15-Berkut-x-CItr7635 - Wheat-2018-NAM15-BxCItr7635_5D BS00003711_51 locus 144.2 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM4-Berkut-x-PI366716 - Wheat-2018-NAM4-BxPI366716_5D BS00003711_51 locus 69.5 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM12-Berkut-x-CItr11223 - Wheat-2018-NAM12-BxCItr11223_5D BS00003711_51 locus 60.9 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM13-Berkut-x-PI262611 - Wheat-2018-NAM13-BxPI262611_5D BS00003711_51 locus 75.6 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM27-Berkut-x-PI192569 - Wheat-2018-NAM27-BxPI192569_5D BS00003711_51 locus 75.8 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM30-Berkut-x-PI278297 - Wheat-2018-NAM30-BxPI278297_5D BS00003711_51 locus 171 () Automated name-based View Maps
Wpt-0400 locus 161.7 Wheat ABD - Wheat, Axiom 2018, Consensus - Wheat-Axiom2018-Cons-2A AX-94861179 locus (cM) Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 5D wPt-0400 locus 97.1 () Automated name-based View Maps
Wheat ABD - Wheat, Yr Update, 2021 - Wheat_Yr_2021-5D wPt-0400 locus 182.09 (cM) Automated name-based View Maps
Xbarc110 locus 137.8 Wheat ABD - Wheat, Composite, 2004 - Wheat-Composite2004-5D Xbarc110 locus 83 () Automated name-based View Maps
Wheat ABD - Wheat, Nanda2419 x Wangshuibai - Ta-NxW-5D Xbarc110 locus 212.8 () Automated name-based View Maps
Xgdm63 locus 125.4 No other positions
Xgwm174 locus 68.9 Wheat ABD - Wheat, Composite, 2004 - Wheat-Composite2004-5D Xgwm174 locus 52 () Automated name-based View Maps
eAACmCCC286 locus 52.5 No other positions
Xgwm159 locus 51.3 No other positions
Xgwm358 locus 48.6 Wheat ABD - Wheat, Composite, 2004 - Wheat-Composite2004-5D Xgwm358 locus 13 () Automated name-based View Maps
Xgwm293 locus 43.1 Wheat AB - T. turgidum, Langdon x G18-16 - Tt-LxG-5A Xgwm293 locus 32.6 () Automated name-based View Maps
Wheat ABD - Wheat, Avalon x Cadenza - Wheat, Avalon x Cadenza 5A1 Xgwm293 locus 77.1 () Automated name-based View Maps
Wheat ABD - Wheat, Composite, 2004 - Wheat-Composite2004-5A Xgwm293 locus 27 () Automated name-based View Maps
Xgwm190 locus 11.9 Wheat ABD - Wheat, Nanda2419 x Wangshuibai - Ta-NxW-5D Xgwm190 locus 16 () Automated name-based View Maps
Wheat ABD - Wheat, Composite, 2004 - Wheat-Composite2004-5D Xgwm190 locus 5 () Automated name-based View Maps
Pinb locus 3.5 Wheat ABD - Wheat_Consensus_2014_Ug99_Rust - Wheat_Consensus_2014_Ug99_Rust_5 Pinb locus 9.36 () Automated name-based View Maps
Pinb-D1 locus 0 Wheat ABD - Wheat-2014-Consensus-Ug99-Update - Wheat-2014-Consensus-Ug99-Update Pinb-D1 locus 9.36 () Automated name-based View Maps
Wheat ABD - Wheat_Consensus_2014_Ug99_Rust - Wheat_Consensus_2014_Ug99_Rust_5 Pinb locus 9.36 () Automated name-based View Maps

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.