*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat ABD-Wheat, Physical, R Genes
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Ta-Physical-RGenes-7A
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
breakpoint
breakpointinterval
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Wheat ABD - Wheat, Physical, R Genes [ View Map Set Info ]
Map Name: Ta-Physical-RGenes-7A
Map Start: -100
Map Stop: 100
Features by Type:
29 breakpoint
29 breakpointinterval
17 locus
75 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 75.       of 3 | Next
Wheat ABD - Wheat, Physical, R Genes - Ta-Physical-RGenes-7A
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
Centromere-7A locus 0 Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-7A Centromere-7A locus 160 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, DR Genes - Ta-Synthetic/Opata-DR-7A Centromere-7A locus 0 () Automated name-based View Maps
Wheat AB - T. turgidum, JK x Cham1 - Tturgidum-JKxC-7A Centromere-7A locus 29.3 () Automated name-based View Maps
Wheat AB - Durum wheat, Svevo x Ciccio - Svevo/Ciccio-7A Centromere-7A locus 108.2 () Automated name-based View Maps
Wheat ABD - Wheat, 2002, coleoptile color - Wheat-2002-ColeoptileColor-7A Centromere-7A locus 60.9 (cM) Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides - Tturgidum-MxM-7A Centromere-7A locus 0 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-7A Centromere-7A locus 107.5 - 111.3 () Automated name-based View Maps
Wheat AB - T. turgidum, Omrabi5 x dicoccoides, QTL - Tt-Oxd-QTL-7A Centromere-7A locus 58.7 () Automated name-based View Maps
Wheat ABD - Wheat, Grandin x BR34 - Ta-Grandin/BR34-7A Centromere-7A locus 83.5 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR 2 - Ta-Synthetic/Opata-SSR2-7A Centromere-7A locus 123.1 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, AFLP - Tturgidum-MxM-AFLP-7A Centromere-7A locus 103.7 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, gbx RFLP - Ta-Synthetic/Opata-gbx-7A Centromere-7A locus 99.5 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, SSR - Tturgidum-SSR-7A Centromere-7A locus 0 () Automated name-based View Maps
XBE591190 locus -95 Wheat ABD - Wheat, Physical, R Genes - Ta-Physical-RGenes-7D XBE591190 locus -85 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, R Genes - Ta-Physical-RGenes-7B XBE591190 locus -27 () Automated name-based View Maps
Xunl173 locus -63 Wheat ABD - Wheat, Physical, R Genes - Ta-Physical-RGenes-7D Xunl173 locus -36 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, R Genes - Ta-Physical-RGenes-7B Xunl173 locus -66 () Automated name-based View Maps
Xunl214c locus -63 No other positions
Xunl134 locus -52 Wheat ABD - Wheat, Physical, R Genes - Ta-Physical-RGenes-7B Xunl134 locus -27 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, R Genes - Ta-Physical-RGenes-7D Xunl134 locus -49 () Automated name-based View Maps
Xunl157 locus -52 Wheat ABD - Wheat, Physical, R Genes - Ta-Physical-RGenes-7D Xunl157 locus -49 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, R Genes - Ta-Physical-RGenes-7B Xunl157 locus -66 () Automated name-based View Maps
Xunl200 locus 9 Wheat ABD - Wheat, Physical, R Genes - Ta-Physical-RGenes-7B Xunl200 locus 7 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, R Genes - Ta-Physical-RGenes-7D Xunl200 locus 5 () Automated name-based View Maps
XBE403270 locus 45 No other positions
Xunl188 locus 45 Wheat ABD - Wheat, Physical, R Genes - Ta-Physical-RGenes-7D Xunl188 locus 68 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, R Genes - Ta-Physical-RGenes-7B Xunl188 locus 42 () Automated name-based View Maps
Xunl151 locus 56 Wheat ABD - Wheat, Physical, R Genes - Ta-Physical-RGenes-7B Xunl151 locus 46 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, R Genes - Ta-Physical-RGenes-7D Xunl151 locus 68 () Automated name-based View Maps
Xunl219 locus 56 Wheat ABD - Wheat, Physical, R Genes - Ta-Physical-RGenes-7D Xunl219 locus 68 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, R Genes - Ta-Physical-RGenes-7B Xunl219 locus 46 () Automated name-based View Maps
XBE518338 locus 68 Wheat ABD - Wheat, Physical, R Genes - Ta-Physical-RGenes-7B XBE518338 locus 94 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, R Genes - Ta-Physical-RGenes-7D XBE518338 locus 68 () Automated name-based View Maps
XBE443579 locus 76 Wheat ABD - Wheat, Physical, R Genes - Ta-Physical-RGenes-7B XBE443579 locus 46 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, R Genes - Ta-Physical-RGenes-7D XBE443579 locus 68 () Automated name-based View Maps
XBE405003 locus 96 Wheat ABD - Wheat, Physical, R Genes - Ta-Physical-RGenes-7B XBE405003 locus 86 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, R Genes - Ta-Physical-RGenes-7D XBE405003 locus 92 () Automated name-based View Maps
XBE405507a locus 96 No other positions
Xunl194b locus 96 No other positions
XBF200008c locus 99 Wheat ABD - Wheat, Physical, R Genes - Ta-Physical-RGenes-7B XBF200008c locus 94 () Automated name-based View Maps
7AS-0.89-1.00 breakpointinterval -100 - -89 No other positions
7AS-0.59-0.66 breakpointinterval -66 - -59 No other positions
7AS-0.45-0.59 breakpointinterval -59 - -45 No other positions
C-7AS-0.21 breakpointinterval -21 - 0 No other positions
C-7AL-0.18 breakpointinterval 0 - 18 No other positions
7AL-0.40-0.49 breakpointinterval 40 - 49 No other positions
7AL-0.49-0.63 breakpointinterval 49 - 63 No other positions
7AL-0.63-0.74 breakpointinterval 63 - 74 No other positions

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.